RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 ZNF860A6NHJ4 632 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 C4orf51C9J302 202 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 STK16O75716 305 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 C2P06681 752 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 CYC1P08574 325 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 SLC35E2BP0CK96 405 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 GNAZP19086 355 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 EPORP19235 508 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 CRABP2P29373 138 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 HSPA7P48741 367 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 OLR1P78380 273 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 BTG2P78543 158 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 RGS1Q08116 209 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 MRPL49Q13405 166 aaKnown RBP8.8□□□□□ -1
HDAC3-215ENST00000519474 RUNX2Q13950 521 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 EFTUD2Q15029 972 aaKnown RBP eCLIP8.8□□□□□ -14e-7■■■■■ 33.4
HDAC3-215ENST00000519474 MINDY4Q4G0A6 757 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 MROH9Q5TGP6 573 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 IRAK1BP1Q5VVH5 260 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 C8orf74Q6P047 294 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 TMIGD1Q6UXZ0 262 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 RIPOR1Q6ZS17 1223 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 FRA10AC1Q70Z53 315 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 VN1R5Q7Z5H4 357 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 KRT77Q7Z794 578 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 CMC1Q7Z7K0 106 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 RELL1Q8IUW5 271 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 IQCKQ8N0W5 287 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 SIRT6Q8N6T7 355 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 NOA1Q8NC60 698 aaKnown RBP8.8□□□□□ -1
HDAC3-215ENST00000519474 OR1N1Q8NGS0 311 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 STAG3L4Q8TBR4 150 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 TBC1D20Q96BZ9 403 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 MRRFQ96E11 262 aaKnown RBP8.8□□□□□ -1
HDAC3-215ENST00000519474 OR1F2PQ96R84 312 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 ATOH8Q96SQ7 321 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 CD244Q9BZW8 370 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 CLK4Q9HAZ1 481 aaKnown RBP8.8□□□□□ -1
HDAC3-215ENST00000519474 NMRAL1Q9HBL8 299 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 DNAJC11Q9NVH1 559 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 RIC8BQ9NVN3 520 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 GPRC5BQ9NZH0 403 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 CD274Q9NZQ7 290 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 ACAD8Q9UKU7 415 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 ASB1Q9Y576 335 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 PCDHGA10Q9Y5H3 936 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 NUP210LQ5VU65 1888 aa8.8□□□□□ -1
HDAC3-215ENST00000519474 BOD1L1Q8NFC6 3051 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 URADA6NGE7 173 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 MAGEB17A8MXT2 336 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 B4GALT2O60909 372 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 SEMA7AO75326 666 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 CDC123O75794 336 aaPredicted RBP8.79□□□□□ -1
HDAC3-215ENST00000519474 SEC24DO94855 1032 aaPredicted RBP8.79□□□□□ -1
HDAC3-215ENST00000519474 WDPCPO95876 746 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 FHP07954 510 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 LTA4HP09960 611 aaKnown RBP8.79□□□□□ -1
HDAC3-215ENST00000519474 MTHFD2P13995 350 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 TFEBP19484 476 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 CD22P20273 847 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 STX2P32856 288 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 CASP2P42575 452 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 AGTR2P50052 363 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 BTN3A2P78410 334 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 ACTN3Q08043 901 aaPredicted RBP8.79□□□□□ -1
HDAC3-215ENST00000519474 PCDH1Q08174 1060 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 CDC16Q13042 620 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 NAB1Q13506 487 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 DOC2AQ14183 400 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 E2F2Q14209 437 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 SLBPQ14493 270 aaKnown RBP eCLIP8.79□□□□□ -1
HDAC3-215ENST00000519474 ZNF169Q14929 603 aaPredicted RBP8.79□□□□□ -1
HDAC3-215ENST00000519474 NSDHLQ15738 373 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 TOR1AIP1Q5JTV8 583 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 PLAG1Q6DJT9 500 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 RPUSD3Q6P087 351 aaKnown RBP8.79□□□□□ -1
HDAC3-215ENST00000519474 RAPH1Q70E73 1250 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 ABHD13Q7L211 337 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 TCAIMQ8N3R3 496 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 FAM26EQ8N5C1 309 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 PDPRQ8NCN5 879 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 M1APQ8TC57 530 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 GIMAP1Q8WWP7 306 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 TSLPQ969D9 159 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 MS4A6EQ96DS6 147 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 WDR34Q96EX3 536 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 PTCHD1Q96NR3 888 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 QRFPRQ96P65 431 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 GPR78Q96P69 363 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 PSMG3-AS1Q96PY0 264 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 NPAS2Q99743 824 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 FUT8Q9BYC5 575 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 ILKAPQ9H0C8 392 aaPredicted RBP8.79□□□□□ -1
HDAC3-215ENST00000519474 EPS8L2Q9H6S3 715 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 ALG9Q9H6U8 611 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 NINJ2Q9NZG7 142 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 MAP10Q9P2G4 905 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 RNF112Q9ULX5 631 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 ACOT9Q9Y305 439 aa8.79□□□□□ -1
HDAC3-215ENST00000519474 CNTRLQ7Z7A1 2325 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms