RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 EMBQ6PCB8 327 aa15.06■□□□□ 0
LIME1-209ENST00000494776 TDRPQ86YL5 185 aa15.06■□□□□ 0
LIME1-209ENST00000494776 GALNT16Q8N428 558 aa15.06■□□□□ 0
LIME1-209ENST00000494776 FDCSPQ8NFU4 85 aa15.06■□□□□ 0
LIME1-209ENST00000494776 OR11G2Q8NGC1 345 aa15.06■□□□□ 0
LIME1-209ENST00000494776 EPS8L3Q8TE67 593 aaKnown RBP15.06■□□□□ 0
LIME1-209ENST00000494776 MS4A6EQ96DS6 147 aa15.06■□□□□ 0
LIME1-209ENST00000494776 OR1F2PQ96R84 312 aa15.06■□□□□ 0
LIME1-209ENST00000494776 RBCK1Q9BYM8 510 aa15.06■□□□□ 0
LIME1-209ENST00000494776 RHBGQ9H310 441 aa15.06■□□□□ 0
LIME1-209ENST00000494776 CLK4Q9HAZ1 481 aaKnown RBP15.06■□□□□ 0
LIME1-209ENST00000494776 GPR83Q9NYM4 423 aa15.06■□□□□ 0
LIME1-209ENST00000494776 TMEM216Q9P0N5 145 aa15.06■□□□□ 0
LIME1-209ENST00000494776 DCDC2Q9UHG0 476 aa15.06■□□□□ 0
LIME1-209ENST00000494776 PCDHGA9Q9Y5G4 932 aaKnown RBP15.06■□□□□ 0
LIME1-209ENST00000494776 NSG1A0A0A6YYJ2 146 aa15.05■□□□□ -0
LIME1-209ENST00000494776 A0A0G2JN53 185 aa15.05■□□□□ -0
LIME1-209ENST00000494776 A0A1W2PPM1 405 aa15.05■□□□□ -0
LIME1-209ENST00000494776 B8ZZF3 427 aa15.05■□□□□ -0
LIME1-209ENST00000494776 E2F3O00716 465 aa15.05■□□□□ -0
LIME1-209ENST00000494776 CDH16O75309 829 aa15.05■□□□□ -0
LIME1-209ENST00000494776 CDC123O75794 336 aaPredicted RBP15.05■□□□□ -0
LIME1-209ENST00000494776 GSTA1P08263 222 aa15.05■□□□□ -0
LIME1-209ENST00000494776 C8orf89P0DMQ9 161 aa15.05■□□□□ -0
LIME1-209ENST00000494776 JAK1P23458 1154 aa15.05■□□□□ -0
LIME1-209ENST00000494776 SERPINB1P30740 379 aa15.05■□□□□ -0
LIME1-209ENST00000494776 HNRNPH1P31943 449 aaKnown RBP15.05■□□□□ -0
LIME1-209ENST00000494776 CCNG1P51959 295 aa15.05■□□□□ -0
LIME1-209ENST00000494776 PHEXP78562 749 aa15.05■□□□□ -0
LIME1-209ENST00000494776 EEF1A2Q05639 463 aaKnown RBP15.05■□□□□ -0
LIME1-209ENST00000494776 PCDH1Q08174 1060 aa15.05■□□□□ -0
LIME1-209ENST00000494776 DDX39BQ13838 428 aaKnown RBP15.05■□□□□ -0
LIME1-209ENST00000494776 ADNP2Q6IQ32 1131 aa15.05■□□□□ -0
LIME1-209ENST00000494776 VN1R5Q7Z5H4 357 aa15.05■□□□□ -0
LIME1-209ENST00000494776 PARP9Q8IXQ6 854 aa15.05■□□□□ -0
LIME1-209ENST00000494776 LAS2Q8IYD9 372 aa15.05■□□□□ -0
LIME1-209ENST00000494776 OR2L5Q8NG80 312 aa15.05■□□□□ -0
LIME1-209ENST00000494776 OR7G3Q8NG95 312 aa15.05■□□□□ -0
LIME1-209ENST00000494776 PPP4R1Q8TF05 950 aa15.05■□□□□ -0
LIME1-209ENST00000494776 AENQ8WTP8 325 aaKnown RBP15.05■□□□□ -0
LIME1-209ENST00000494776 TBC1D20Q96BZ9 403 aa15.05■□□□□ -0
LIME1-209ENST00000494776 REPS1Q96D71 796 aa15.05■□□□□ -0
LIME1-209ENST00000494776 PARD6BQ9BYG5 372 aa15.05■□□□□ -0
LIME1-209ENST00000494776 VN1R1Q9GZP7 353 aa15.05■□□□□ -0
LIME1-209ENST00000494776 NOL11Q9H8H0 719 aaKnown RBP15.05■□□□□ -0
LIME1-209ENST00000494776 COPS7BQ9H9Q2 264 aaPredicted RBP15.05■□□□□ -0
LIME1-209ENST00000494776 ZNF160Q9HCG1 818 aa15.05■□□□□ -0
LIME1-209ENST00000494776 C19orf25Q9UFG5 118 aaPredicted RBP15.05■□□□□ -0
LIME1-209ENST00000494776 ADGRE2Q9UHX3 823 aa15.05■□□□□ -0
LIME1-209ENST00000494776 ZNF451Q9Y4E5 1061 aa15.05■□□□□ -0
LIME1-209ENST00000494776 PCDHGA11Q9Y5H2 935 aa15.05■□□□□ -0
LIME1-209ENST00000494776 SCN3AQ9NY46 2000 aa15.04■□□□□ -0
LIME1-209ENST00000494776 K7EM74 188 aa15.04■□□□□ -0
LIME1-209ENST00000494776 B3GALT2O43825 422 aa15.04■□□□□ -0
LIME1-209ENST00000494776 UGDHO60701 494 aa15.04■□□□□ -0
LIME1-209ENST00000494776 B4GALT2O60909 372 aa15.04■□□□□ -0
LIME1-209ENST00000494776 DNAJB6O75190 326 aa15.04■□□□□ -0
LIME1-209ENST00000494776 SH3BGRLO75368 114 aa15.04■□□□□ -0
LIME1-209ENST00000494776 CEACAM4O75871 244 aa15.04■□□□□ -0
LIME1-209ENST00000494776 CLDN9O95484 217 aa15.04■□□□□ -0
LIME1-209ENST00000494776 HPP00738 406 aa15.04■□□□□ -0
LIME1-209ENST00000494776 TGFB1P01137 390 aa15.04■□□□□ -0
LIME1-209ENST00000494776 ALPPP05187 535 aa15.04■□□□□ -0
LIME1-209ENST00000494776 FHP07954 510 aa15.04■□□□□ -0
LIME1-209ENST00000494776 CYC1P08574 325 aa15.04■□□□□ -0
LIME1-209ENST00000494776 SMIM10L1P0DMW3 83 aa15.04■□□□□ -0
LIME1-209ENST00000494776 RNH1P13489 461 aaKnown RBP15.04■□□□□ -0
LIME1-209ENST00000494776 E2F2Q14209 437 aa15.04■□□□□ -0
LIME1-209ENST00000494776 CPSF6Q16630 551 aaKnown RBP eCLIP15.04■□□□□ -0
LIME1-209ENST00000494776 CHSY3Q70JA7 882 aa15.04■□□□□ -0
LIME1-209ENST00000494776 NDUFAF7Q7L592 441 aa15.04■□□□□ -0
LIME1-209ENST00000494776 PRICKLE2Q7Z3G6 844 aa15.04■□□□□ -0
LIME1-209ENST00000494776 TEX19Q8NA77 164 aa15.04■□□□□ -0
LIME1-209ENST00000494776 SRFBP1Q8NEF9 429 aaKnown RBP15.04■□□□□ -0
LIME1-209ENST00000494776 OR2W6PQ8NHA6 318 aa15.04■□□□□ -0
LIME1-209ENST00000494776 MZB1Q8WU39 189 aa15.04■□□□□ -0
LIME1-209ENST00000494776 SMIM10Q96HG1 83 aa15.04■□□□□ -0
LIME1-209ENST00000494776 F2RL3Q96RI0 385 aa15.04■□□□□ -0
LIME1-209ENST00000494776 MESP1Q9BRJ9 268 aa15.04■□□□□ -0
LIME1-209ENST00000494776 NUDT9Q9BW91 350 aa15.04■□□□□ -0
LIME1-209ENST00000494776 SEMA4BQ9NPR2 832 aaPredicted RBP15.04■□□□□ -0
LIME1-209ENST00000494776 PCTPQ9UKL6 214 aa15.04■□□□□ -0
LIME1-209ENST00000494776 OR2W5A6NFC9 320 aa15.03■□□□□ -0
LIME1-209ENST00000494776 A8MT66 165 aa15.03■□□□□ -0
LIME1-209ENST00000494776 FOXO6A8MYZ6 492 aa15.03■□□□□ -0
LIME1-209ENST00000494776 C4orf51C9J302 202 aa15.03■□□□□ -0
LIME1-209ENST00000494776 GLRA3O75311 464 aa15.03■□□□□ -0
LIME1-209ENST00000494776 COX6A1P12074 109 aa15.03■□□□□ -0
LIME1-209ENST00000494776 DEKP35659 375 aaKnown RBP15.03■□□□□ -0
LIME1-209ENST00000494776 CCT5P48643 541 aa15.03■□□□□ -0
LIME1-209ENST00000494776 ACTN3Q08043 901 aaPredicted RBP15.03■□□□□ -0
LIME1-209ENST00000494776 MYBPC3Q14896 1274 aa15.03■□□□□ -0
LIME1-209ENST00000494776 RASA2Q15283 850 aa15.03■□□□□ -0
LIME1-209ENST00000494776 NSDHLQ15738 373 aa15.03■□□□□ -0
LIME1-209ENST00000494776 ADPRMQ3LIE5 342 aa15.03■□□□□ -0
LIME1-209ENST00000494776 VWA5B1Q5TIE3 1220 aa15.03■□□□□ -0
LIME1-209ENST00000494776 TTC19Q6DKK2 380 aaPredicted RBP15.03■□□□□ -0
LIME1-209ENST00000494776 SHISA5Q8N114 240 aa15.03■□□□□ -0
LIME1-209ENST00000494776 CYP4X1Q8N118 509 aa15.03■□□□□ -0
LIME1-209ENST00000494776 TMEM151AQ8N4L1 468 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms