RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 HIST1H2AHQ96KK5 128 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 PTCHD1Q96NR3 888 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 CSF3RQ99062 836 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 NAP1L3Q99457 506 aaPredicted RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 HIST1H2AJQ99878 128 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 EGFL8Q99944 293 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 H2AFJQ9BTM1 129 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 SORBS1Q9BX66 1292 aaKnown RBP8.35□□□□□ -1.07
HDAC3-211ENST00000491581 SLC6A16Q9GZN6 736 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 MOCS1Q9NZB8 636 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 SEC14L3Q9UDX4 400 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 NPIPA1Q9UND3 350 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 CLDN16Q9Y5I7 305 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 HRH3Q9Y5N1 445 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 CSMD2Q7Z408 3487 aa8.35□□□□□ -1.07
HDAC3-211ENST00000491581 FBN2P35556 2912 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 CSMD1Q96PZ7 3565 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 SPTAN1Q13813 2472 aaKnown RBP8.34□□□□□ -1.07
HDAC3-211ENST00000491581 A0A0G2JMM0 328 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 A0A1W2PPB8 328 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 A0A1W2PRS3 328 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 PINLYPA6NC86 204 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 LRRC14BA6NHZ5 514 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 KIR3DP1A8MWS1 328 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 MAGEB17A8MXT2 336 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 G3V3Y1 287 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 EIF3FO00303 357 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-211ENST00000491581 SAP18O00422 153 aaKnown RBP8.34□□□□□ -1.07
HDAC3-211ENST00000491581 RTCAO00442 366 aaKnown RBP8.34□□□□□ -1.07
HDAC3-211ENST00000491581 CES2O00748 559 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 TXNDC9O14530 226 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 ZSCAN12O43309 604 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 RAD51CO43502 376 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 PRKRAO75569 313 aaKnown RBP8.34□□□□□ -1.07
HDAC3-211ENST00000491581 TTC4O95801 387 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 TCP1P17987 556 aaKnown RBP8.34□□□□□ -1.07
HDAC3-211ENST00000491581 HSPA7P48741 367 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 GPX6P59796 221 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 GPR85P60893 370 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 ID2Q02363 134 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 MGAT5Q09328 741 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 SLBPQ14493 270 aaKnown RBP eCLIP8.34□□□□□ -1.07
HDAC3-211ENST00000491581 MYO7BQ6PIF6 2116 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 RIPOR1Q6ZS17 1223 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 KIAA0408Q6ZU52 694 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 MDGA2Q7Z553 956 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 CMC1Q7Z7K0 106 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 RPRMLQ8N4K4 120 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 ELP5Q8TE02 316 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 CCT6BQ92526 530 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 RHBDF1Q96CC6 855 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 MRRFQ96E11 262 aaKnown RBP8.34□□□□□ -1.07
HDAC3-211ENST00000491581 PDLIM2Q96JY6 352 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 FRMD6Q96NE9 622 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 SAYSD1Q9NPB0 183 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 GRHL1Q9NZI5 618 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 ZFATQ9P243 1243 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 ZFP69BQ9UJL9 534 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 ZNF490Q9ULM2 529 aaPredicted RBP8.34□□□□□ -1.07
HDAC3-211ENST00000491581 SLC22A7Q9Y694 548 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 TEX15Q9BXT5 2789 aa8.34□□□□□ -1.07
HDAC3-211ENST00000491581 NCOA6Q14686 2063 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-211ENST00000491581 DIDO1Q9BTC0 2240 aaKnown RBP8.33□□□□□ -1.08
HDAC3-211ENST00000491581 IGKV3D-11A0A0A0MRZ8 115 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 WASHC1A8K0Z3 465 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 E7ESA3 106 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 NDC80O14777 642 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 KLHL41O60662 606 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 ZNF354AO60765 605 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-211ENST00000491581 MYO1DO94832 1006 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 CCDC166P0CW27 439 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 CERS1P27544 350 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 PTGER1P34995 402 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 GRK3P35626 688 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 SLC6A12P48065 614 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 AGTR2P50052 363 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 PLA2G16P53816 162 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 ARL4CP56559 192 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 KRTAP10-9P60411 292 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 IRF9Q00978 393 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 MAPKAPK3Q16644 382 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 ARMC3Q5W041 872 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 PCGF5Q86SE9 256 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 MRGPRGQ86SM5 289 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 PLPP5Q8NEB5 264 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 M1APQ8TC57 530 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 ADAMTS18Q8TE60 1221 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 UCN3Q969E3 161 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 MS4A6EQ96DS6 147 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 THAP11Q96EK4 314 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 SCMH1Q96GD3 660 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 VPS50Q96JG6 964 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 F2RL3Q96RI0 385 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 LPAR4Q99677 370 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 NAPGQ99747 312 aaPredicted RBP8.33□□□□□ -1.08
HDAC3-211ENST00000491581 UTP23Q9BRU9 249 aaKnown RBP8.33□□□□□ -1.08
HDAC3-211ENST00000491581 HAUS8Q9BT25 410 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 SARGQ9BW04 601 aa8.33□□□□□ -1.08
HDAC3-211ENST00000491581 PCBD2Q9H0N5 130 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms