RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ZFP90Q8TF47 636 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 C16orf78Q8WTQ4 265 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 TSACCQ96A04 125 aaPredicted RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 CAMK1GQ96NX5 476 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 SMURF2Q9HAU4 748 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 MYNNQ9NPC7 610 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 PNMA8BQ9ULN7 279 aaPredicted RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 VPS4AQ9UN37 437 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 CORO2BQ9UQ03 480 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 GMEB1Q9Y692 573 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 GOLGA4Q13439 2230 aaKnown RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 E2F6O75461 281 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 KLHL18O94889 574 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 NTRK1P04629 796 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 ETS2P15036 469 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 PPIBP23284 216 aaKnown RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 AK4P27144 223 aaPredicted RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 PPP2R2BQ00005 443 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 PDE7AQ13946 482 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 MYBPC3Q14896 1274 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 PLCL1Q15111 1095 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 RGNQ15493 299 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 R3HCC1LQ7Z5L2 792 aaKnown RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 GALNT10Q86SR1 603 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 ZDHHC21Q8IVQ6 265 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 FAM20CQ8IXL6 584 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 ZFP28Q8NHY6 868 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 JPH3Q8WXH2 748 aaPredicted RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 NCSTNQ92542 709 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 PPCDCQ96CD2 204 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 RDH12Q96NR8 316 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 GAS2L1Q99501 681 aaPredicted RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 OSBPL10Q9BXB5 764 aa15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 RBM38Q9H0Z9 239 aaKnown RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 PAPOLBQ9NRJ5 636 aaKnown RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 ZNF282Q9UDV7 671 aaPredicted RBP15.4■□□□□ 0.06
AP000253.1-201ENST00000449339 FEZF1A0PJY2 475 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 VILLO15195 856 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 AHCYL1O43865 530 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 NOBOXO60393 691 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 EML2O95834 649 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 NUDT7P0C024 238 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 RPL3P39023 403 aaKnown RBP15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 DCTP40126 519 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 HBA1P69905 142 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 CYP4F2P78329 520 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 C2orf80Q0P641 193 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 VEZF1Q14119 521 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 C11orf91Q3C1V1 193 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 FBXO43Q4G163 708 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 FAM71E1Q6IPT2 247 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 TMEM179BQ7Z7N9 219 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 SYNPOQ8N3V7 929 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 CCL4L1Q8NHW4 92 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 ASB12Q8WXK4 309 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 SMPDL3AQ92484 453 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 SCARF2Q96GP6 870 aaPredicted RBP15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 MUS81Q96NY9 551 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 RBM4BQ9BQ04 359 aaKnown RBP15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 RBM4Q9BWF3 364 aaKnown RBP15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 SPATA9Q9BWV2 254 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 SORBS1Q9BX66 1292 aaKnown RBP15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 PCBD2Q9H0N5 130 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 CHST8Q9H2A9 424 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 SPASTQ9UBP0 616 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 RPS6KA6Q9UK32 745 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 U3KQV3 271 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 SNRNP200O75643 2136 aaKnown RBP15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 CCDC160A6NGH7 325 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 ANKDD1BA6NHY2 528 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 H7BY64 318 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 AXIN1O15169 862 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 KRT33BQ14525 404 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 UAP1L1Q3KQV9 507 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 TRIM69Q86WT6 500 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 ANKRD53Q8N9V6 530 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 OR5K1Q8NHB7 308 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 GOT1L1Q8NHS2 421 aaPredicted RBP15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 PRAP1Q96NZ9 151 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 OR2M4Q96R27 311 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 AIF1LQ9BQI0 150 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 TOR3AQ9H497 397 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 PELI2Q9HAT8 420 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 IL1RAPQ9NPH3 570 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 WASH6PQ9NQA3 447 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 USE1Q9NZ43 259 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 SPATA7Q9P0W8 599 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 COMMD3-BMI1R4GMX3 469 aa15.39■□□□□ 0.05
AP000253.1-201ENST00000449339 A0A087WXM4 84 aa15.38■□□□□ 0.05
AP000253.1-201ENST00000449339 TRIM64A6NGJ6 449 aa15.38■□□□□ 0.05
AP000253.1-201ENST00000449339 TBX6O95947 436 aaPredicted RBP15.38■□□□□ 0.05
AP000253.1-201ENST00000449339 CXCR2P25025 360 aa15.38■□□□□ 0.05
AP000253.1-201ENST00000449339 KIAA1024LP59773 190 aa15.38■□□□□ 0.05
AP000253.1-201ENST00000449339 NFATC4Q14934 902 aa15.38■□□□□ 0.05
AP000253.1-201ENST00000449339 RPE65Q16518 533 aa15.38■□□□□ 0.05
AP000253.1-201ENST00000449339 SLC9B2Q86UD5 537 aa15.38■□□□□ 0.05
AP000253.1-201ENST00000449339 FRMD1Q8N878 549 aa15.38■□□□□ 0.05
AP000253.1-201ENST00000449339 ABHD11Q8NFV4 315 aa15.38■□□□□ 0.05
AP000253.1-201ENST00000449339 MAL2Q969L2 176 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms