RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 FZD2Q14332 565 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CHI3L2Q15782 390 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 ZXDCQ2QGD7 858 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 ALG11Q2TAA5 492 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 TTLL9Q3SXZ7 439 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CCSMST1Q4G0I0 132 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 FBXO48Q5FWF7 155 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 FAM219BQ5XKK7 198 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 METRNLQ641Q3 311 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 ENPP7Q6UWV6 458 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 LAYNQ6UX15 382 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 RGS9BPQ6ZS82 235 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 RPS27LQ71UM5 84 aaKnown RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 AMZ2Q86W34 360 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 GPSM1Q86YR5 675 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 C1orf210Q8IVY1 113 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 SLC22A15Q8IZD6 547 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 LSMEM2Q8N112 164 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CCDC63Q8NA47 563 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 OR56A4Q8NGH8 313 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 STAG3L4Q8TBR4 150 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 RDH11Q8TC12 318 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 BRIX1Q8TDN6 353 aaKnown RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 DYDC1Q8WWB3 177 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 ASZ1Q8WWH4 475 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 SNX19Q92543 992 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 TSACCQ96A04 125 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 PHF21BQ96EK2 531 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 WDR92Q96MX6 357 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 TSNARE1Q96NA8 513 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 PAIP1Q9H074 479 aaKnown RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 PCED1AQ9H1Q7 454 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 OR52A5Q9H2C5 316 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 TCEAL2Q9H3H9 227 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 MANSC1Q9H8J5 431 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 COG4Q9H9E3 785 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 SLCO1B3Q9NPD5 702 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 MOSPD1Q9UJG1 213 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 PDE10AQ9Y233 779 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 DNAJC16Q9Y2G8 782 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 LAMA1P25391 3075 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CEP192Q8TEP8 1941 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 THADAQ6YHU6 1953 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 GMNCA6NCL1 334 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 NCF1BA6NI72 391 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 NCF1CA8MVU1 366 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 ARHGEF33A8MVX0 844 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 GPR89AB7ZAQ6 455 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 PPP6CO00743 305 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 LIN7AO14910 233 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 TAPBPO15533 448 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 LAMTOR5O43504 91 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 SNNO75324 88 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 LYPLA1O75608 230 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 IPO13O94829 963 aaKnown RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 SIX3O95343 332 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 EML2O95834 649 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 GPR89BP0CG08 455 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 THEGLP0DJG4 465 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 TPBGLP0DKB5 382 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 ACP5P13686 325 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 NCF1P14598 390 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 NUDT1P36639 197 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 RABIFP47224 123 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 AGTR2P50052 363 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 KPNA2P52292 529 aaKnown RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 NAGLUP54802 743 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 DNAJB13P59910 316 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 SRP54P61011 504 aaKnown RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 DMPKQ09013 629 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 TGFBIQ15582 683 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 TSTQ16762 297 aaKnown RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 UNC50Q53HI1 259 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 ZNF542PQ5EBM4 170 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 PRR31Q5SQ13 230 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 TMTC4Q5T4D3 741 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 KANK2Q63ZY3 851 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CGB2Q6NT52 195 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 KLC3Q6P597 504 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 SLC36A4Q6YBV0 504 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 MBOAT1Q6ZNC8 495 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 RINLQ6ZS11 566 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 RD3Q7Z3Z2 195 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 BMP8AQ7Z5Y6 402 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 LONP2Q86WA8 852 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 NRROSQ86YC3 692 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 SDR16C5Q8N3Y7 309 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 PTGR2Q8N8N7 351 aaPredicted RBP3.43□□□□□ -1.86
MCF2-202ENST00000370573 LMNTD1Q8N9Z9 388 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CFAP61Q8NHU2 1237 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 CCL4L1Q8NHW4 92 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 HM13Q8TCT9 377 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 LRRC8CQ8TDW0 803 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 DNASE2BQ8WZ79 361 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 EXT2Q93063 718 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 ESAMQ96AP7 390 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 PDXPQ96GD0 296 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 HIST1H2AHQ96KK5 128 aa3.43□□□□□ -1.86
MCF2-202ENST00000370573 RMDN2Q96LZ7 410 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms