RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 CACHD1Q5VU97 1274 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 USP45Q70EL2 814 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 SNX20Q7Z614 316 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 MILR1Q7Z6M3 343 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 TSPYL5Q86VY4 417 aaPredicted RBP9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 STK40Q8N2I9 435 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 OR6F1Q8NGZ6 308 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 LKAAEAR1Q8TD35 194 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 FCGR1BQ92637 280 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 SLC38A4Q969I6 547 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZHX1-C8orf76Q96EF9 292 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 FAM120BQ96EK7 910 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 METTL2AQ96IZ6 378 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 RIPOR3Q96MK2 946 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 KCNH6Q9H252 994 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 NSUN3Q9H649 340 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 CLDND1Q9NY35 253 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 VNN3Q9NY84 501 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZMYM5Q9UJ78 669 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 NDRG4Q9ULP0 352 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 CFL2Q9Y281 166 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 GMPPBQ9Y5P6 360 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 TCF20Q9UGU0 1960 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 A0A096LPI6 279 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 METTL15A6NJ78 407 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 EFCAB9A8MZ26 197 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 E9PQ18 207 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 H7C0S8 307 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 WNT9AO14904 365 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ESR1P03372 595 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 C1SP09871 688 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 CD36P16671 472 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ARHGDIAP52565 204 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 NKX2-5P52952 324 aaPredicted RBP9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ST8SIA6P61647 398 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 DMC1Q14565 340 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 MAD2L1BPQ15013 274 aaPredicted RBP9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZNF404Q494X3 552 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZFP69Q49AA0 526 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 SPANXN4Q5MJ08 99 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ATAT1Q5SQI0 421 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZNF648Q5T619 568 aaPredicted RBP9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 GCNT7Q6ZNI0 430 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 Q6ZVL8 140 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 TRIM46Q7Z4K8 759 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZDHHC21Q8IVQ6 265 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ANKRD53Q8N9V6 530 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 ZNF540Q8NDQ6 660 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 PSMA8Q8TAA3 256 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 NXF2Q9GZY0 626 aaKnown RBP9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 LMAN2LQ9H0V9 348 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 RIBC2Q9H4K1 309 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 POLE4Q9NR33 117 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 GDE1Q9NZC3 331 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 OPTCQ9UBM4 332 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 IL36AQ9UHA7 158 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 DHRS7Q9Y394 339 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 GRIP1Q9Y3R0 1128 aa9.94□□□□□ -0.82
APOBEC3F-201ENST00000308521 AGAP5A6NIR3 686 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 FAM20BO75063 409 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 POU2F2P09086 479 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 TIMP2P16035 220 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 GDI1P31150 447 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 GJA4P35212 333 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 SPAM1P38567 509 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 PTGER3P43115 390 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 GNPDA1P46926 289 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 CLCN7P51798 805 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 ABHD18Q0P651 414 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 SIM2Q14190 667 aaPredicted RBP9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 PTGR1Q14914 329 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 MAPK11Q15759 364 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 YIF1BQ5BJH7 314 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 PTRHD1Q6GMV3 140 aaKnown RBP9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 OR2T5Q6IEZ7 315 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 CES5AQ6NT32 575 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 XKRXQ6PP77 449 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 HDDC2Q7Z4H3 204 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 HSD11B1LQ7Z5J1 315 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 GALNT12Q8IXK2 581 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 RAVER1Q8IY67 606 aaKnown RBP9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 PGBD3Q8N328 593 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 OR2T29Q8NH02 315 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 PITX2Q99697 317 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 TMEM246Q9BRR3 403 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 WRAP53Q9BUR4 548 aaKnown RBP9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 DCSTAMPQ9H295 470 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 IPPKQ9H8X2 491 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 FAM8A1Q9UBU6 413 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 SAMD4AQ9UPU9 718 aaKnown RBP9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 MYO15AQ9UKN7 3530 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 SEC22BO75396 215 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 CCNDBP1O95273 360 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 FADS2O95864 444 aaKnown RBP9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 PCSK2P16519 638 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 HOXB9P17482 250 aaPredicted RBP9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 ITGALP20701 1170 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 FPR1P21462 350 aa9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 DNAJA1P31689 397 aaKnown RBP9.93□□□□□ -0.82
APOBEC3F-201ENST00000308521 SLC9A3P48764 834 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms