RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 GNPTGQ9UJJ9 305 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 RUVBL1Q9Y265 456 aaKnown RBP7.41□□□□□ -1.22
CLK1-215ENST00000621181 MEMO1Q9Y316 297 aa7.41□□□□□ -1.22
CLK1-215ENST00000621181 A0A0A6YYC8 382 aaPredicted RBP7.4□□□□□ -1.23
CLK1-215ENST00000621181 A0A1W2PPV9 198 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 CFAP73A6NFT4 308 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 ERI2A8K979 691 aaKnown RBP7.4□□□□□ -1.23
CLK1-215ENST00000621181 NPIPA5E9PKD4 350 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 I3L1I5 382 aaPredicted RBP7.4□□□□□ -1.23
CLK1-215ENST00000621181 KPNA5O15131 536 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 DIAPH2O60879 1101 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 SEC24DO94855 1032 aaPredicted RBP7.4□□□□□ -1.23
CLK1-215ENST00000621181 ABOP16442 354 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 EEF1DP29692 281 aaKnown RBP7.4□□□□□ -1.23
CLK1-215ENST00000621181 VPS41P49754 854 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 MNAT1P51948 309 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 YBX1P67809 324 aaKnown RBP7.4□□□□□ -1.23
CLK1-215ENST00000621181 ALDH6A1Q02252 535 aaKnown RBP7.4□□□□□ -1.23
CLK1-215ENST00000621181 FASTKQ14296 549 aaKnown RBP7.4□□□□□ -1.23
CLK1-215ENST00000621181 SEMA3AQ14563 771 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 MORF4L2Q15014 288 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 SNCBQ16143 134 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 SYT16Q17RD7 645 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 MINDY4Q4G0A6 757 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 ACER2Q5QJU3 275 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 GARNL3Q5VVW2 1013 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 FCRLBQ6BAA4 426 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 FBXO42Q6P3S6 717 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 SUSD1Q6UWL2 747 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 CEP128Q6ZU80 1094 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 ZNF534Q76KX8 674 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 ASRGL1Q7L266 308 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 SPATA21Q7Z572 469 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 BEST3Q8N1M1 668 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 CA5BP1Q8WTZ4 195 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 IMMP1LQ96LU5 166 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 GPR137Q96N19 417 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 PLCD4Q9BRC7 762 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 WDR83Q9BRX9 315 aaKnown RBP7.4□□□□□ -1.23
CLK1-215ENST00000621181 PHACTR1Q9C0D0 580 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 MCCC2Q9HCC0 563 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 CATSPERZQ9NTU4 200 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 SPATA7Q9P0W8 599 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 NPIPA1Q9UND3 350 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 ARL2BPQ9Y2Y0 163 aa7.4□□□□□ -1.23
CLK1-215ENST00000621181 INTS1Q8N201 2190 aaKnown RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 IGHV3-20A0A0C4DH32 117 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 TXNDC9O14530 226 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 ATP6V1G2O95670 118 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 PKMP14618 531 aaKnown RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 ETS1P14921 441 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 ADRA1DP25100 572 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 RPA3P35244 121 aaPredicted RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 MAT1AQ00266 395 aaKnown RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 FASTKD3Q14CZ7 662 aaKnown RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 KRTAP21-3Q3LHN1 58 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 PLAG1Q6DJT9 500 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 BLOC1S3Q6QNY0 202 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 TMEM205Q6UW68 189 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 C3P1Q6ZMU1 363 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 Q6ZPB1 254 aaPredicted RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 NCCRP1Q6ZVX7 275 aaPredicted RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 ADCK2Q7Z695 626 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 ZC3H7AQ8IWR0 971 aaKnown RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 EID3Q8N140 333 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 FITM2Q8N6M3 262 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 AMER2Q8N7J2 671 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 CCDC63Q8NA47 563 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 TMEM178AQ8NBL3 297 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 FAM98AQ8NCA5 519 aaKnown RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 MGARPQ8TDB4 240 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 AGAP11Q8TF27 550 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 MZB1Q8WU39 189 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 ZNF354BQ96LW1 612 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 SIGLEC12Q96PQ1 595 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 UTP23Q9BRU9 249 aaKnown RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 VN1R1Q9GZP7 353 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 C19orf25Q9UFG5 118 aaPredicted RBP7.39□□□□□ -1.23
CLK1-215ENST00000621181 FETUBQ9UGM5 382 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 MCM8Q9UJA3 840 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 RIMKLBQ9ULI2 386 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 ZNF835Q9Y2P0 537 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 PCDHGB6Q9Y5F9 930 aa7.39□□□□□ -1.23
CLK1-215ENST00000621181 IGKV1-8A0A0C4DH67 115 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 E7ESA3 106 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 CD3EAPO15446 510 aaKnown RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 FOXS1O43638 330 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 TYROBPO43914 113 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 NDUFS3O75489 264 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 SUN1O94901 812 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 TSPAN12O95859 305 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 IFNB1P01574 187 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 EZRP15311 586 aaKnown RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 CD46P15529 392 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 NQO1P15559 274 aaKnown RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 GRIA1P42261 906 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 AVPR1BP47901 424 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 ST13P50502 369 aaKnown RBP7.38□□□□□ -1.23
CLK1-215ENST00000621181 GPX6P59796 221 aa7.38□□□□□ -1.23
CLK1-215ENST00000621181 CSNK1G2P78368 415 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms