RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 EML2O95834 649 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 PGRP06401 933 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 CELA2BP08218 269 aaPredicted RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 T-ENOLP0DO92 83 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ITGAXP20702 1163 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 PPIBP23284 216 aaKnown RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 ME2P23368 584 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 NTSP30990 170 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 TLX1P31314 330 aaPredicted RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 BUD31P41223 144 aaPredicted RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 CTSKP43235 329 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 DUSP3P51452 185 aaPredicted RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 MAZP56270 477 aaKnown RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 PSME3P61289 254 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 UFM1P61960 85 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 TRA2BP62995 288 aaKnown RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 KCNJ2P63252 427 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 CSNK1G2P78368 415 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 DAB2P98082 770 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 BNIP2Q12982 314 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 PWP1Q13610 501 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 FLOT2Q14254 428 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SLC9A5Q14940 896 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ANGPT1Q15389 498 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 NR0B2Q15466 257 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 NDUFA9Q16795 377 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SPRED3Q2MJR0 410 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ZXDCQ2QGD7 858 aaPredicted RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 HKDC1Q2TB90 917 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 PLK5Q496M5 336 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 VPS26BQ4G0F5 336 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 WASHC2DQ5SRD0 308 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 TMTC4Q5T4D3 741 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 CPTPQ5TA50 214 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 KIAA1614Q5VZ46 1190 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 FIGLAQ6QHK4 219 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ANGPTL8Q6UXH0 198 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 NET1Q7Z628 596 aaPredicted RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 PLXDC1Q8IUK5 500 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ULK2Q8IYT8 1036 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ADGRF3Q8IZF5 1079 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 DSELQ8IZU8 1212 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 CARFQ8N187 725 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 METTL4Q8N3J2 472 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ARL14Q8N4G2 192 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 TMEM105Q8N8V8 129 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 C19orf47Q8N9M1 422 aaKnown RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 TTC29Q8NA56 475 aaPredicted RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 MFSD9Q8NBP5 474 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 OR2L5Q8NG80 312 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 OR4K1Q8NGD4 311 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ZFP28Q8NHY6 868 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 PROKR1Q8TCW9 393 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 PATE1Q8WXA2 126 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 NAT6Q93015 286 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 CCDC124Q96CT7 223 aaKnown RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 APIPQ96GX9 242 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 RSRC1Q96IZ7 334 aaKnown RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 ZC3H10Q96K80 434 aaKnown RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 PANX1Q96RD7 426 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 TBCDQ9BTW9 1192 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SLC6A16Q9GZN6 736 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ABCG4Q9H172 646 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 OR51B5Q9H339 312 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SEMA6CQ9H3T2 930 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 RAD21L1Q9H4I0 556 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 CLMPQ9H6B4 373 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SYNDIG1Q9H7V2 258 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 IL1RL2Q9HB29 575 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SLC6A20Q9NP91 592 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 MYNNQ9NPC7 610 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 C1GALT1Q9NS00 363 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SIRT5Q9NXA8 310 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SPHK1Q9NYA1 384 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ZNF282Q9UDV7 671 aaPredicted RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 KLF15Q9UIH9 416 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 PHF11Q9UIL8 331 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 GMEB2Q9UKD1 530 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 PILRBQ9UKJ0 227 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 POMT2Q9UKY4 750 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 PNMA8BQ9ULN7 279 aaPredicted RBP5.92□□□□□ -1.46
LIG3-206ENST00000586058 SLC6A14Q9UN76 642 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 ENTPD4Q9Y227 616 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SNX11Q9Y5W9 270 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 SCN2AQ99250 2005 aa5.92□□□□□ -1.46
LIG3-206ENST00000586058 TECTAO75443 2155 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 CACNA1IQ9P0X4 2223 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 A0A0J9YVX5 310 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 A0A1B0GTQ1 180 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 OR2A25A4D2G3 310 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 TMEM247A6NEH6 219 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 TNFRSF10AO00220 468 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 SAP18O00422 153 aaKnown RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 GSTA4O15217 222 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 AKAP10O43572 662 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 B3GALT2O43825 422 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 FKBP6O75344 327 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 ERN1O75460 977 aaKnown RBP5.91□□□□□ -1.46
LIG3-206ENST00000586058 BMP10O95393 424 aa5.91□□□□□ -1.46
LIG3-206ENST00000586058 EIF2S1P05198 315 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms