RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CENPKQ9BS16 269 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 ENAMQ9NRM1 1142 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 SIRT5Q9NXA8 310 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 AHSPQ9NZD4 102 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 TMED5Q9Y3A6 229 aa17.23■□□□□ 0.35
CLPX-203ENST00000558958 PLPP1O14494 284 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 ZSCAN9O15535 394 aaPredicted RBP17.22■□□□□ 0.35
CLPX-203ENST00000558958 ACPPP15309 386 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 NCF2P19878 526 aaPredicted RBP17.22■□□□□ 0.35
CLPX-203ENST00000558958 MAD2L1Q13257 205 aaPredicted RBP17.22■□□□□ 0.35
CLPX-203ENST00000558958 HKDC1Q2TB90 917 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 PRTGQ2VWP7 1150 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 GALNT18Q6P9A2 607 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 RBM44Q6ZP01 1051 aaKnown RBP17.22■□□□□ 0.35
CLPX-203ENST00000558958 COMMD6Q7Z4G1 85 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 MTDHQ86UE4 582 aaKnown RBP17.22■□□□□ 0.35
CLPX-203ENST00000558958 KIAA2013Q8IYS2 634 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 C1orf52Q8N6N3 182 aaKnown RBP17.22■□□□□ 0.35
CLPX-203ENST00000558958 OR2L5Q8NG80 312 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 NETO1Q8TDF5 533 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 RGMAQ96B86 450 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 CATSPER2Q96P56 530 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 C1orf50Q9BV19 199 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 ZNF717Q9BY31 904 aaPredicted RBP17.22■□□□□ 0.35
CLPX-203ENST00000558958 NLNQ9BYT8 704 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 NMUR2Q9GZQ4 415 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 ASIC5Q9NY37 505 aa17.22■□□□□ 0.35
CLPX-203ENST00000558958 RUVBL1Q9Y265 456 aaKnown RBP17.22■□□□□ 0.35
CLPX-203ENST00000558958 C4orf51C9J302 202 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 TXNDC9O14530 226 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 TM4SF5O14894 197 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 ERI3O43414 337 aaKnown RBP17.21■□□□□ 0.35
CLPX-203ENST00000558958 GFRA3O60609 400 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 DCTN3O75935 186 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 CSRP1P21291 193 aaKnown RBP17.21■□□□□ 0.35
CLPX-203ENST00000558958 BSGP35613 385 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 RAP1GDS1P52306 607 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 ARFIP1P53367 373 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 PLA2G16P53816 162 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 DIO3P55073 304 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 RAE1P78406 368 aaKnown RBP17.21■□□□□ 0.35
CLPX-203ENST00000558958 INSM1Q01101 510 aaPredicted RBP17.21■□□□□ 0.35
CLPX-203ENST00000558958 GPR19Q15760 415 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 TCTE1Q5JU00 501 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 IL23RQ5VWK5 629 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 NOXRED1Q6NXP6 359 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 ABHD17CQ6PCB6 329 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 DGLUCYQ7Z3D6 616 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 PARP9Q8IXQ6 854 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 SRFBP1Q8NEF9 429 aaKnown RBP17.21■□□□□ 0.35
CLPX-203ENST00000558958 N4BP2L2Q92802 583 aaPredicted RBP17.21■□□□□ 0.35
CLPX-203ENST00000558958 MARK4Q96L34 752 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 TMEM74Q96NL1 305 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 ZNF385DQ9H6B1 395 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 LHX9Q9NQ69 397 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 SAR1AQ9NR31 198 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 STARD5Q9NSY2 213 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 NOP53Q9NZM5 478 aaKnown RBP17.21■□□□□ 0.35
CLPX-203ENST00000558958 G3BP2Q9UN86 482 aaKnown RBP17.21■□□□□ 0.35
CLPX-203ENST00000558958 EIF3LQ9Y262 564 aaKnown RBP17.21■□□□□ 0.35
CLPX-203ENST00000558958 DLGAP4Q9Y2H0 992 aa17.21■□□□□ 0.35
CLPX-203ENST00000558958 URADA6NGE7 173 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 TMEM150CB9EJG8 249 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 H3BMH7 237 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 FCHO1O14526 889 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 CCDC22O60826 627 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 SMIM10L1P0DMW3 83 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 CDK4P11802 303 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 MAPK1P28482 360 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 CCKBRP32239 447 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 GSTA3Q16772 222 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 CDCP2Q5VXM1 449 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 TMEM214Q6NUQ4 689 aaKnown RBP17.2■□□□□ 0.34
CLPX-203ENST00000558958 ARHGEF39Q8N4T4 335 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 UTP15Q8TED0 518 aaKnown RBP17.2■□□□□ 0.34
CLPX-203ENST00000558958 GAL3ST3Q96A11 431 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 SMIM10Q96HG1 83 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 KCNC2Q96PR1 638 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 C17orf62Q9BQA9 187 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 MYLK2Q9H1R3 596 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 FGF21Q9NSA1 209 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 AIG1Q9NVV5 245 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 POLR3HQ9Y535 204 aaPredicted RBP17.2■□□□□ 0.34
CLPX-203ENST00000558958 DMXL1Q9Y485 3027 aa17.2■□□□□ 0.34
CLPX-203ENST00000558958 COL27A1Q8IZC6 1860 aaPredicted RBP17.2■□□□□ 0.34
CLPX-203ENST00000558958 FITM1A5D6W6 292 aa17.19■□□□□ 0.34
CLPX-203ENST00000558958 RTCAO00442 366 aaKnown RBP17.19■□□□□ 0.34
CLPX-203ENST00000558958 MYO1DO94832 1006 aa17.19■□□□□ 0.34
CLPX-203ENST00000558958 DKK1O94907 266 aa17.19■□□□□ 0.34
CLPX-203ENST00000558958 ZNF888P0CJ79 500 aaPredicted RBP17.19■□□□□ 0.34
CLPX-203ENST00000558958 G6PDP11413 515 aa17.19■□□□□ 0.34
CLPX-203ENST00000558958 BCKDHAP12694 445 aa17.19■□□□□ 0.34
CLPX-203ENST00000558958 IDO1P14902 403 aa17.19■□□□□ 0.34
CLPX-203ENST00000558958 TIA1P31483 386 aaKnown RBP eCLIP17.19■□□□□ 0.345e-6■□□□□ 8.7
CLPX-203ENST00000558958 SNRPNP63162 240 aaKnown RBP17.19■□□□□ 0.34
CLPX-203ENST00000558958 ACY1Q03154 408 aa17.19■□□□□ 0.34
CLPX-203ENST00000558958 TGM3Q08188 693 aa17.19■□□□□ 0.34
CLPX-203ENST00000558958 C16orf72Q14CZ0 275 aa17.19■□□□□ 0.34
CLPX-203ENST00000558958 OR4C11Q6IEV9 310 aa17.19■□□□□ 0.34
CLPX-203ENST00000558958 TRIM40Q6P9F5 258 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms