RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 ITGA3P26006 1051 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 GSTM2P28161 218 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 SERPINB8P50452 374 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 EMP2P54851 167 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 MAT1AQ00266 395 aaKnown RBP12.37□□□□□ -0.43
SHMT2-211ENST00000554310 RGS1Q08116 209 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 CDC16Q13042 620 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 OR4D1Q15615 310 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 SYT16Q17RD7 645 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 IRAK1BP1Q5VVH5 260 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 TTC19Q6DKK2 380 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-211ENST00000554310 PRSS41Q7RTY9 318 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 LRRC70Q7Z2Q7 622 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 EXOC3L1Q86VI1 746 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 AFAP1L2Q8N4X5 818 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 KCT2Q8NC54 265 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 ZNF740Q8NDX6 193 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 TRPV3Q8NET8 790 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 STAG3L4Q8TBR4 150 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 BCAS4Q8TDM0 211 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 TM9SF4Q92544 642 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 SEC16BQ96JE7 1060 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 MACROD1Q9BQ69 325 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 PITHD1Q9GZP4 211 aaPredicted RBP12.37□□□□□ -0.43
SHMT2-211ENST00000554310 EHD1Q9H4M9 534 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 DNAJC11Q9NVH1 559 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 NUDT4Q9NZJ9 180 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 CD274Q9NZQ7 290 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 ACOT9Q9Y305 439 aa12.37□□□□□ -0.43
SHMT2-211ENST00000554310 PRRC2CQ9Y520 2896 aaKnown RBP12.36□□□□□ -0.43
SHMT2-211ENST00000554310 FLNBO75369 2602 aaKnown RBP12.36□□□□□ -0.43
SHMT2-211ENST00000554310 CNTRLQ7Z7A1 2325 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 EXOC1LA0A1B0GW35 172 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 TAPBPO15533 448 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 KERAO60938 352 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 STK16O75716 305 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 KLHL18O94889 574 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 WISP1O95388 367 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 HEXBP07686 556 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 COX6A1P12074 109 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 ALOX12P18054 663 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 TFEBP19484 476 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 IL10P22301 178 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 GDF5P43026 501 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 XCR1P46094 333 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 CSRP3P50461 194 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 SNRPNP63162 240 aaKnown RBP12.36□□□□□ -0.43
SHMT2-211ENST00000554310 RAPSNQ13702 412 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 BMPR2Q13873 1038 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 PDK4Q16654 411 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 C18orf21Q32NC0 220 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-211ENST00000554310 MROH9Q5TGP6 573 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 ATG9BQ674R7 924 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 SLCO4C1Q6ZQN7 724 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 ABHD13Q7L211 337 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 LAPTM4BQ86VI4 370 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 PDSS2Q86YH6 399 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 ANKRD53Q8N9V6 530 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 TTLQ8NG68 377 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 SLC6A16Q9GZN6 736 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 ALG9Q9H6U8 611 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 ZNF552Q9H707 407 aaPredicted RBP12.36□□□□□ -0.43
SHMT2-211ENST00000554310 SNX15Q9NRS6 342 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 IGSF5Q9NSI5 407 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 RIC8BQ9NVN3 520 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 HCN3Q9P1Z3 774 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 MKL2Q9ULH7 1088 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 NAALAD2Q9Y3Q0 740 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 SCN3AQ9NY46 2000 aa12.36□□□□□ -0.43
SHMT2-211ENST00000554310 LOC102723996A0A087X1L8 192 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 NSG1A0A0A6YYJ2 146 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 HMX2A2RU54 273 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 URADA6NGE7 173 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 SGK494L7N484 410 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 GALR3O60755 368 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-211ENST00000554310 ALOX12BO75342 701 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 RDH16O75452 317 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 SORBS2O94875 1100 aaKnown RBP12.35□□□□□ -0.43
SHMT2-211ENST00000554310 BMP10O95393 424 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 SERPIND1P05546 499 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 INHBAP08476 426 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 C8orf89P0DMQ9 161 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 C1GALT1C1LP0DN25 315 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 CHN1P15882 459 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 VARSP26640 1264 aaKnown RBP12.35□□□□□ -0.43
SHMT2-211ENST00000554310 HSPA7P48741 367 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 HNRNPH2P55795 449 aaKnown RBP12.35□□□□□ -0.43
SHMT2-211ENST00000554310 DLG1Q12959 904 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 SLBPQ14493 270 aaKnown RBP eCLIP12.35□□□□□ -0.43
SHMT2-211ENST00000554310 FAM83EQ2M2I3 478 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 IGFL3Q6UXB1 125 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 NDUFAF7Q7L592 441 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 ISCA2Q86U28 154 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 CENPLQ8N0S6 344 aaPredicted RBP12.35□□□□□ -0.43
SHMT2-211ENST00000554310 KRT78Q8N1N4 520 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 OR51Q1Q8NH59 317 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 RHEBL1Q8TAI7 183 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 UBTD2Q8WUN7 234 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 SLC44A1Q8WWI5 657 aa12.35□□□□□ -0.43
SHMT2-211ENST00000554310 METTL21AQ8WXB1 218 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms