RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 GALR3O60755 368 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-208ENST00000486404 KERAO60938 352 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 STK16O75716 305 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 WFS1O76024 890 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 SEC24DO94855 1032 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-208ENST00000486404 ACSL3O95573 720 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 C1QAP02745 245 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 SERPINA7P05543 415 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 LTA4HP09960 611 aaKnown RBP12.17□□□□□ -0.46
CHMP3-208ENST00000486404 PRR35P0CG20 571 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 C1GALT1C1LP0DN25 315 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 TFEBP19484 476 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 IL10P22301 178 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 GSTM2P28161 218 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 HPDP32754 393 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-208ENST00000486404 AGTR2P50052 363 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 SERPINB8P50452 374 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 STXBP1P61764 594 aaKnown RBP12.17□□□□□ -0.46
CHMP3-208ENST00000486404 SNRPNP63162 240 aaKnown RBP12.17□□□□□ -0.46
CHMP3-208ENST00000486404 OLR1P78380 273 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 ARG2P78540 354 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 Q0VFX4 171 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 MFAP5Q13361 173 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 ABRAXAS2Q15018 415 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 PCOLCEQ15113 449 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 GLE1Q53GS7 698 aaKnown RBP12.17□□□□□ -0.46
CHMP3-208ENST00000486404 FBXO48Q5FWF7 155 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 XKR6Q5GH73 641 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 MROH9Q5TGP6 573 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 KLC3Q6P597 504 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 TMEM205Q6UW68 189 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 TMIGD1Q6UXZ0 262 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 RIPOR1Q6ZS17 1223 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 LANCL3Q6ZV70 420 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 LRRC70Q7Z2Q7 622 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 CCDC91Q7Z6B0 441 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 KLHDC8AQ8IYD2 350 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 AFAP1L2Q8N4X5 818 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 SIRT6Q8N6T7 355 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 ANKRD53Q8N9V6 530 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 Q8NA96 180 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 GALNT11Q8NCW6 608 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 OR5T3Q8NGG3 340 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 STAG3L4Q8TBR4 150 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 BRIX1Q8TDN6 353 aaKnown RBP12.17□□□□□ -0.46
CHMP3-208ENST00000486404 FAR2Q96K12 515 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 MAGEB10Q96LZ2 347 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-208ENST00000486404 ACSS3Q9H6R3 686 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 PTGFRNQ9P2B2 879 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 ACOT9Q9Y305 439 aa12.17□□□□□ -0.46
CHMP3-208ENST00000486404 CNTRLQ7Z7A1 2325 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 SPENQ96T58 3664 aaKnown RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 PRRC2CQ9Y520 2896 aaKnown RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 LOC102723996A0A087X1L8 192 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 A0A088AWK7 358 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 DYTNA2CJ06 578 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 SYCE1LA8MT33 242 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 FHP07954 510 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 SERPINA6P08185 405 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 INHBAP08476 426 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 ICAM2P13598 275 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 ZNF10P21506 573 aaPredicted RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 RAB8AP61006 207 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 FAM83EQ2M2I3 478 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 BTBD16Q32M84 506 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 PLEKHN1Q494U1 663 aaPredicted RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 PAGE2BQ5JRK9 111 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 SLCO4C1Q6ZQN7 724 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 CPEB2Q7Z5Q1 589 aaKnown RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 CEP112Q8N8E3 955 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 DNAJB14Q8TBM8 379 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 UTP15Q8TED0 518 aaKnown RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 GAL3ST3Q96A11 431 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 TBC1D20Q96BZ9 403 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 PTCD3Q96EY7 689 aaKnown RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 UBXN10Q96LJ8 280 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 EFCAB11Q9BUY7 163 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 SLC6A16Q9GZN6 736 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 PITHD1Q9GZP4 211 aaPredicted RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 CDC42EP4Q9H3Q1 356 aaKnown RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 EHD1Q9H4M9 534 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 COPS7BQ9H9Q2 264 aaPredicted RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 ZBTB20Q9HC78 741 aaPredicted RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 SNX15Q9NRS6 342 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 DMGDHQ9UI17 866 aaKnown RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 TEKT2Q9UIF3 430 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 ASH1LQ9NR48 2969 aaKnown RBP12.16□□□□□ -0.46
CHMP3-208ENST00000486404 FLNCQ14315 2725 aa12.16□□□□□ -0.46
CHMP3-208ENST00000486404 IGHV3-20A0A0C4DH32 117 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 ANKDD1BA6NHY2 528 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 UBXN8O00124 270 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 TAPBPO15533 448 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 ERI3O43414 337 aaKnown RBP12.15□□□□□ -0.46
CHMP3-208ENST00000486404 CHST10O43529 356 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 B4GALT2O60909 372 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 B3GALT4O96024 378 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 CELA2AP08217 269 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 RNH1P13489 461 aaKnown RBP12.15□□□□□ -0.46
CHMP3-208ENST00000486404 GFAPP14136 432 aa12.15□□□□□ -0.46
CHMP3-208ENST00000486404 GNLYP22749 145 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms