RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 CPSF6Q16630 551 aaKnown RBP eCLIP11.24□□□□□ -0.61
HPS4-214ENST00000485842 SYT16Q17RD7 645 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 UNC50Q53HI1 259 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 ZNF678Q5SXM1 525 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 LIPJQ5W064 366 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 MRPL14Q6P1L8 145 aaKnown RBP11.24□□□□□ -0.61
HPS4-214ENST00000485842 ABHD13Q7L211 337 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 OVCH1Q7RTY7 1134 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 GPR155Q7Z3F1 870 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 VN1R5Q7Z5H4 357 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 CROCCP2Q86T23 111 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 PDSS2Q86YH6 399 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 TMEM151BQ8IW70 566 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 LAS2Q8IYD9 372 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 AMER3Q8N944 861 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 OR7G3Q8NG95 312 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 RDH11Q8TC12 318 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 TCP10LQ8TDR4 215 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 UTP15Q8TED0 518 aaKnown RBP11.24□□□□□ -0.61
HPS4-214ENST00000485842 CCDC126Q96EE4 140 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 FAM111AQ96PZ2 611 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 C1QTNF3Q9BXJ4 246 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 SLC6A16Q9GZN6 736 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 AICDAQ9GZX7 198 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 KLHL31Q9H511 634 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 SOX17Q9H6I2 414 aaPredicted RBP11.24□□□□□ -0.61
HPS4-214ENST00000485842 ARGLU1Q9NWB6 273 aaPredicted RBP11.24□□□□□ -0.61
HPS4-214ENST00000485842 SENP1Q9P0U3 644 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 COPG2Q9UBF2 871 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 LHX6Q9UPM6 363 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 PLLPQ9Y342 182 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 NAALAD2Q9Y3Q0 740 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 SLC22A7Q9Y694 548 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 CACNA1BQ00975 2339 aa11.24□□□□□ -0.61
HPS4-214ENST00000485842 GOLGA6L10A6NI86 522 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 H0YIG0 161 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 PPP6CO00743 305 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 ERI3O43414 337 aaKnown RBP11.23□□□□□ -0.61
HPS4-214ENST00000485842 UGDHO60701 494 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 OTCP00480 354 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 CD63P08962 238 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 MYZAPP0CAP1 466 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 IMPDH1P20839 514 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 HNRNPH1P31943 449 aaKnown RBP11.23□□□□□ -0.61
HPS4-214ENST00000485842 OTX2P32243 289 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 PLA2G16P53816 162 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 SKP1P63208 163 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 OLR1P78380 273 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 OCA2Q04671 838 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 CLCQ05315 142 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 PCDH1Q08174 1060 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 CASP8Q14790 479 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 PCLAFQ15004 111 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 ZRSR2Q15696 482 aaKnown RBP11.23□□□□□ -0.61
HPS4-214ENST00000485842 NKG7Q16617 165 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 FAM219BQ5XKK7 198 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 TTC19Q6DKK2 380 aaPredicted RBP11.23□□□□□ -0.61
HPS4-214ENST00000485842 MILR1Q7Z6M3 343 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 RNF175Q8N4F7 328 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 L3MBTL4Q8NA19 623 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 OR4F6Q8NGB9 312 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 OR2Y1Q8NGV0 311 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 ZNF473Q8WTR7 871 aaKnown RBP11.23□□□□□ -0.61
HPS4-214ENST00000485842 GAL3ST3Q96A11 431 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 MIEF2Q96C03 454 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 REPS1Q96D71 796 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 L3HYPDHQ96EM0 354 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 SEC16BQ96JE7 1060 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 FAR2Q96K12 515 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 MTERF1Q99551 399 aaKnown RBP11.23□□□□□ -0.61
HPS4-214ENST00000485842 SPSB2Q99619 263 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 NTMT1Q9BV86 223 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 RBCK1Q9BYM8 510 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 FAM117AQ9C073 453 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 RHBGQ9H310 441 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 ZNF282Q9UDV7 671 aaPredicted RBP11.23□□□□□ -0.61
HPS4-214ENST00000485842 NXT1Q9UKK6 140 aaKnown RBP11.23□□□□□ -0.61
HPS4-214ENST00000485842 MAP4K5Q9Y4K4 846 aa11.23□□□□□ -0.61
HPS4-214ENST00000485842 ZZEF1O43149 2961 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 A0A1B0GTL3 188 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 GALR3O60755 368 aaPredicted RBP11.22□□□□□ -0.61
HPS4-214ENST00000485842 KLF7O75840 302 aaPredicted RBP11.22□□□□□ -0.61
HPS4-214ENST00000485842 OR4F21O95013 312 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 ONECUT2O95948 504 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 TGFB1P01137 390 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 ALBP02768 609 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 FURINP09958 794 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 DSPP15924 2871 aaKnown RBP11.22□□□□□ -0.61
HPS4-214ENST00000485842 SERPINB1P30740 379 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 XCR1P46094 333 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 NEK2P51955 445 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 NAGLUP54802 743 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 BTN3A2P78410 334 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 PHEXP78562 749 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 UGT8Q16880 541 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 DEFB109BQ30KR1 87 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 VWA2Q5GFL6 755 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 CFAP157Q5JU67 520 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 MFSD4BQ5TF39 518 aa11.22□□□□□ -0.61
HPS4-214ENST00000485842 LETMD1Q6P1Q0 360 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms