RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 SH3BGRLO75368 114 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 CEACAM1P13688 526 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 ERVK-8P63133 956 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 C16orf72Q14CZ0 275 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 GPR19Q15760 415 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 HKDC1Q2TB90 917 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 RFTN2Q52LD8 501 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-203ENST00000449049 TOR1AIP1Q5JTV8 583 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 TCTE1Q5JU00 501 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 SPDYAQ5MJ70 313 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 WASHC2DQ5SRD0 308 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 METTL21CQ5VZV1 264 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 NXNQ6DKJ4 435 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 ANKS4BQ8N8V4 417 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 KCT2Q8NC54 265 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 OR2L5Q8NG80 312 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 ZNF501Q96CX3 271 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-203ENST00000449049 RILPQ96NA2 401 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 ZNF717Q9BY31 904 aaPredicted RBP13.39□□□□□ -0.27
SHMT2-203ENST00000449049 NLNQ9BYT8 704 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 KLHL31Q9H511 634 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 TMED5Q9Y3A6 229 aa13.39□□□□□ -0.27
SHMT2-203ENST00000449049 SPAARA0A1B0GVQ0 90 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 FITM1A5D6W6 292 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 C4orf51C9J302 202 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 SAP18O00422 153 aaKnown RBP13.38□□□□□ -0.27
SHMT2-203ENST00000449049 PLPP1O14494 284 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 SEC22BO75396 215 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 EIF2S1P05198 315 aaKnown RBP13.38□□□□□ -0.27
SHMT2-203ENST00000449049 FTH1P19P0C7X4 201 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 SMIM10L1P0DMW3 83 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 ACPPP15309 386 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 ACY1Q03154 408 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 EMX2Q04743 252 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 TMEM214Q6NUQ4 689 aaKnown RBP13.38□□□□□ -0.27
SHMT2-203ENST00000449049 DHRS13Q6UX07 377 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 SPATA19Q7Z5L4 167 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 UBE3DQ7Z6J8 389 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 ALYREFQ86V81 257 aaKnown RBP13.38□□□□□ -0.27
SHMT2-203ENST00000449049 CCDC197Q8NCU1 140 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 N4BP2L2Q92802 583 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-203ENST00000449049 GAL3ST3Q96A11 431 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 RGMAQ96B86 450 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 SMIM10Q96HG1 83 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 CENPKQ9BS16 269 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 FANCEQ9HB96 536 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 ASIC5Q9NY37 505 aa13.38□□□□□ -0.27
SHMT2-203ENST00000449049 RUVBL1Q9Y265 456 aaKnown RBP13.38□□□□□ -0.27
SHMT2-203ENST00000449049 URADA6NGE7 173 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 TMEM150CB9EJG8 249 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 E9PBE3 544 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 KLHL41O60662 606 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 ALDOCP09972 364 aaKnown RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 RAP1GDS1P52306 607 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 EMP3P54852 163 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 RPL38P63173 70 aaKnown RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 ACSM2AQ08AH3 577 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 MAD2L1Q13257 205 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 ACSM2BQ68CK6 577 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 GALNT18Q6P9A2 607 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 ABHD17CQ6PCB6 329 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 C1orf52Q8N6N3 182 aaKnown RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 FNDC5Q8NAU1 212 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 AGBL5Q8NDL9 886 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 SRFBP1Q8NEF9 429 aaKnown RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 UTP15Q8TED0 518 aaKnown RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 LHX9Q9NQ69 397 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 FGF21Q9NSA1 209 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 AHSPQ9NZD4 102 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 TMX2-CTNND1H3BSU7 103 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 ERI3O43414 337 aaKnown RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 MT-CO3P00414 261 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 CSTF2P33240 577 aaKnown RBP eCLIP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 BSGP35613 385 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 TSFMP43897 325 aaKnown RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 RAE1P78406 368 aaKnown RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 TGM3Q08188 693 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 ISXQ2M1V0 245 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 TMEM198Q66K66 360 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 TRIM40Q6P9F5 258 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 DGLUCYQ7Z3D6 616 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 COMMD6Q7Z4G1 85 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 PARP9Q8IXQ6 854 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 CACNA2D3Q8IZS8 1091 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 BMPERQ8N8U9 685 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 OR1L3Q8NH93 324 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 KCNC2Q96PR1 638 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 SPRTNQ9H040 489 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 PRDM7Q9NQW5 492 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 STARD5Q9NSY2 213 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 NOP53Q9NZM5 478 aaKnown RBP13.37□□□□□ -0.27
SHMT2-203ENST00000449049 HEY2Q9UBP5 337 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 ADAM29Q9UKF5 820 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 TRIM33Q9UPN9 1127 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 SLC22A7Q9Y694 548 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 UNC13CQ8NB66 2214 aa13.37□□□□□ -0.27
SHMT2-203ENST00000449049 UBDO15205 165 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 OR2B3O76000 313 aa13.36□□□□□ -0.27
SHMT2-203ENST00000449049 ZNF888P0CJ79 500 aaPredicted RBP13.36□□□□□ -0.27
SHMT2-203ENST00000449049 TIA1P31483 386 aaKnown RBP eCLIP13.36□□□□□ -0.273e-16■■■□□ 15.8
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms