RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 SLC39A1Q9NY26 324 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PISDQ9UG56 409 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 ADAM21Q9UKJ8 722 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SLC12A4Q9UP95 1085 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SATB2Q9UPW6 733 aa18.53■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SPTBP11277 2137 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 HYKKA2RU49 373 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 URADA6NGE7 173 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 C4orf51C9J302 202 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SH3BGRLO75368 114 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 RSL1D1O76021 490 aaKnown RBP18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MED26O95402 600 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 JMJD7P0C870 316 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SMIM10L1P0DMW3 83 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PRPH2P23942 346 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SNRPNP63162 240 aaKnown RBP18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 C3orf38Q5JPI3 329 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 YOD1Q5VVQ6 348 aaPredicted RBP18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CGB2Q6NT52 195 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CEACAM20Q6UY09 585 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 OR2L5Q8NG80 312 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 UTP15Q8TED0 518 aaKnown RBP18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PMEPA1Q969W9 287 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 GAL3ST3Q96A11 431 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SMIM10Q96HG1 83 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 CTRCQ99895 268 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PFDN4Q9NQP4 134 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 VPS29Q9UBQ0 182 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 MRPS2Q9Y399 296 aaKnown RBP18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 PCDHGA8Q9Y5G5 932 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 SLC22A7Q9Y694 548 aa18.52■□□□□ 0.56
MAP1LC3A-203ENST00000397709 KNTC1P50748 2209 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 TRPC5OSA6NMA1 111 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ZNF749O43361 778 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 RGS14O43566 566 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 SHOX2O60902 331 aaPredicted RBP18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 TIAF1O95411 115 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ZNF888P0CJ79 500 aaPredicted RBP18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 HOXD11P31277 338 aaPredicted RBP18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ARFIP1P53367 373 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 MAPK10P53779 464 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 SEC24CP53992 1094 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 TBL3Q12788 808 aaKnown RBP18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 IMPG1Q17R60 797 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 PRAMEF17Q5VTA0 474 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 PWWP2BQ6NUJ5 590 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ABHD17CQ6PCB6 329 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ABHD13Q7L211 337 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 UBE3DQ7Z6J8 389 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ZCCHC10Q8TBK6 192 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 TAAR9Q96RI9 348 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 DDA1Q9BW61 102 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 CUTCQ9NTM9 273 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 NMRK1Q9NWW6 199 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 PCDHB3Q9Y5E6 796 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 PCDHGA3Q9Y5H0 932 aa18.51■□□□□ 0.55
MAP1LC3A-203ENST00000397709 DCHS1Q96JQ0 3298 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 GMNCA6NCL1 334 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 SAP18O00422 153 aaKnown RBP18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 PLPP1O14494 284 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 SDHDO14521 159 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 LSM1O15116 133 aaKnown RBP18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ERI3O43414 337 aaKnown RBP18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 SCRG1O75711 98 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ALOX12P18054 663 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ID4P47928 161 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ARSFP54793 590 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 TGM3Q08188 693 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 FAM53BQ14153 422 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 NDUFA9Q16795 377 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 MUM1Q2TAK8 710 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 FAM214AQ32MH5 1076 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 DCAF12Q5T6F0 453 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 VWA5B1Q5TIE3 1220 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 TRIM40Q6P9F5 258 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 EPGNQ6UW88 154 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 TMEM126BQ8IUX1 230 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 METTL4Q8N3J2 472 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 SRFBP1Q8NEF9 429 aaKnown RBP18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 RGMAQ96B86 450 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 PPP1R36Q96LQ0 422 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 TEFMQ96QE5 360 aaKnown RBP18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 SIKE1Q9BRV8 207 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 CENPKQ9BS16 269 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ZPBPQ9BS86 351 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 NDC1Q9BTX1 674 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ZNF717Q9BY31 904 aaPredicted RBP18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 TRIM55Q9BYV6 548 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 LHX9Q9NQ69 397 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 RIC8BQ9NVN3 520 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 SRPK3Q9UPE1 567 aa18.5■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ATP6AP2A0A1C7CYW4 349 aa18.49■□□□□ 0.55
MAP1LC3A-203ENST00000397709 SRRM3A6NNA2 597 aaPredicted RBP18.49■□□□□ 0.55
MAP1LC3A-203ENST00000397709 ATP6AP2O75787 350 aa18.49■□□□□ 0.55
MAP1LC3A-203ENST00000397709 PRR35P0CG20 571 aa18.49■□□□□ 0.55
MAP1LC3A-203ENST00000397709 TROVE2P10155 538 aaKnown RBP eCLIP18.49■□□□□ 0.55
MAP1LC3A-203ENST00000397709 DRD4P21917 467 aa18.49■□□□□ 0.55
MAP1LC3A-203ENST00000397709 RAP1GDS1P52306 607 aa18.49■□□□□ 0.55
MAP1LC3A-203ENST00000397709 PLA2G16P53816 162 aa18.49■□□□□ 0.55
MAP1LC3A-203ENST00000397709 AQP5P55064 265 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms