RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 C4orf51C9J302 202 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 H3BMH7 237 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 TM4SF5O14894 197 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 ACPPP15309 386 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 FOLR1P15328 257 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 ARFIP1P53367 373 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 DIO3P55073 304 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 STXBP1P61764 594 aaKnown RBP25.78■■□□□ 1.72
SSBP4-202ENST00000348495 ACSM2AQ08AH3 577 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 PRTGQ2VWP7 1150 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 TMTC4Q5T4D3 741 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 ACSM2BQ68CK6 577 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 MTDHQ86UE4 582 aaKnown RBP25.78■■□□□ 1.72
SSBP4-202ENST00000348495 ZNF655Q8N720 491 aaPredicted RBP25.78■■□□□ 1.72
SSBP4-202ENST00000348495 OR2L5Q8NG80 312 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 C1orf50Q9BV19 199 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 NMUR2Q9GZQ4 415 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 MYLK2Q9H1R3 596 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 LHX9Q9NQ69 397 aa25.78■■□□□ 1.72
SSBP4-202ENST00000348495 ZSCAN9O15535 394 aaPredicted RBP25.77■■□□□ 1.72
SSBP4-202ENST00000348495 EIF2S1P05198 315 aaKnown RBP25.77■■□□□ 1.72
SSBP4-202ENST00000348495 RAE1P78406 368 aaKnown RBP25.77■■□□□ 1.72
SSBP4-202ENST00000348495 INSM1Q01101 510 aaPredicted RBP25.77■■□□□ 1.72
SSBP4-202ENST00000348495 MAD2L1Q13257 205 aaPredicted RBP25.77■■□□□ 1.72
SSBP4-202ENST00000348495 TOR1AIP1Q5JTV8 583 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 WASHC2DQ5SRD0 308 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 TMEM214Q6NUQ4 689 aaKnown RBP25.77■■□□□ 1.72
SSBP4-202ENST00000348495 RBM44Q6ZP01 1051 aaKnown RBP25.77■■□□□ 1.72
SSBP4-202ENST00000348495 DGLUCYQ7Z3D6 616 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 COMMD6Q7Z4G1 85 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 NETO1Q8TDF5 533 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 RGMAQ96B86 450 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 MARK4Q96L34 752 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 CATSPER2Q96P56 530 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 CENPKQ9BS16 269 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 SAR1AQ9NR31 198 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 AHSPQ9NZD4 102 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 NOP53Q9NZM5 478 aaKnown RBP25.77■■□□□ 1.72
SSBP4-202ENST00000348495 DKK1O94907 266 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 SMIM10L1P0DMW3 83 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 GPR19Q15760 415 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 PHF19Q5T6S3 580 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 CDCP2Q5VXM1 449 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 NOXRED1Q6NXP6 359 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 ABHD17CQ6PCB6 329 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 SMIM10Q96HG1 83 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 AIG1Q9NVV5 245 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 RUVBL1Q9Y265 456 aaKnown RBP25.77■■□□□ 1.72
SSBP4-202ENST00000348495 DLGAP4Q9Y2H0 992 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 GPR45Q9Y5Y3 372 aa25.77■■□□□ 1.72
SSBP4-202ENST00000348495 FCHO1O14526 889 aa25.76■■□□□ 1.71
SSBP4-202ENST00000348495 TXNDC9O14530 226 aa25.76■■□□□ 1.71
SSBP4-202ENST00000348495 CCDC22O60826 627 aa25.76■■□□□ 1.71
SSBP4-202ENST00000348495 DCTN3O75935 186 aa25.76■■□□□ 1.71
SSBP4-202ENST00000348495 NCF2P19878 526 aaPredicted RBP25.76■■□□□ 1.71
SSBP4-202ENST00000348495 CSRP1P21291 193 aaKnown RBP25.76■■□□□ 1.71
SSBP4-202ENST00000348495 BSGP35613 385 aa25.76■■□□□ 1.71
SSBP4-202ENST00000348495 SNRPNP63162 240 aaKnown RBP25.76■■□□□ 1.71
SSBP4-202ENST00000348495 TCTE1Q5JU00 501 aa25.76■■□□□ 1.71
SSBP4-202ENST00000348495 IL23RQ5VWK5 629 aa25.76■■□□□ 1.71
SSBP4-202ENST00000348495 PARP9Q8IXQ6 854 aa25.76■■□□□ 1.71
SSBP4-202ENST00000348495 KIAA2013Q8IYS2 634 aa25.76■■□□□ 1.71
SSBP4-202ENST00000348495 CPSF7Q8N684 471 aaKnown RBP25.76■■□□□ 1.71
SSBP4-202ENST00000348495 UTP15Q8TED0 518 aaKnown RBP25.76■■□□□ 1.71
SSBP4-202ENST00000348495 GAL3ST3Q96A11 431 aa25.76■■□□□ 1.71
SSBP4-202ENST00000348495 SIDT1Q9NXL6 827 aaKnown RBP25.76■■□□□ 1.71
SSBP4-202ENST00000348495 G3BP2Q9UN86 482 aaKnown RBP25.76■■□□□ 1.71
SSBP4-202ENST00000348495 COPG1Q9Y678 874 aaKnown RBP25.76■■□□□ 1.71
SSBP4-202ENST00000348495 FITM1A5D6W6 292 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 ERI3O43414 337 aaKnown RBP25.75■■□□□ 1.71
SSBP4-202ENST00000348495 CCKBRP32239 447 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 MRPL19P49406 292 aaKnown RBP25.75■■□□□ 1.71
SSBP4-202ENST00000348495 RAP1GDS1P52306 607 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 GSTA3Q16772 222 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 CCDC157Q569K6 752 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 SRFBP1Q8NEF9 429 aaKnown RBP25.75■■□□□ 1.71
SSBP4-202ENST00000348495 TMEM74Q96NL1 305 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 LRRC37BQ96QE4 947 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 C17orf62Q9BQA9 187 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 SORBS1Q9BX66 1292 aaKnown RBP25.75■■□□□ 1.71
SSBP4-202ENST00000348495 NLNQ9BYT8 704 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 BRINP2Q9C0B6 783 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 PRDM7Q9NQW5 492 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 STARD5Q9NSY2 213 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 EIF3LQ9Y262 564 aaKnown RBP25.75■■□□□ 1.71
SSBP4-202ENST00000348495 POLR3HQ9Y535 204 aaPredicted RBP25.75■■□□□ 1.71
SSBP4-202ENST00000348495 SPEGQ15772 3267 aa25.75■■□□□ 1.71
SSBP4-202ENST00000348495 RTCAO00442 366 aaKnown RBP25.74■■□□□ 1.71
SSBP4-202ENST00000348495 KLHL18O94889 574 aa25.74■■□□□ 1.71
SSBP4-202ENST00000348495 BCKDHAP12694 445 aa25.74■■□□□ 1.71
SSBP4-202ENST00000348495 IDO1P14902 403 aa25.74■■□□□ 1.71
SSBP4-202ENST00000348495 TIA1P31483 386 aaKnown RBP eCLIP25.74■■□□□ 1.71
SSBP4-202ENST00000348495 ATP4BP51164 291 aa25.74■■□□□ 1.71
SSBP4-202ENST00000348495 PLA2G16P53816 162 aa25.74■■□□□ 1.71
SSBP4-202ENST00000348495 IRX1P78414 480 aaPredicted RBP25.74■■□□□ 1.71
SSBP4-202ENST00000348495 C16orf72Q14CZ0 275 aa25.74■■□□□ 1.71
SSBP4-202ENST00000348495 OR4C11Q6IEV9 310 aa25.74■■□□□ 1.71
SSBP4-202ENST00000348495 ZNF501Q96CX3 271 aaPredicted RBP25.74■■□□□ 1.71
SSBP4-202ENST00000348495 KCNC2Q96PR1 638 aa25.74■■□□□ 1.71
SSBP4-202ENST00000348495 TEFMQ96QE5 360 aaKnown RBP25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms