RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 ACSL5Q9ULC5 683 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 GBF1Q92538 1859 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 ZNF217O75362 1048 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 SLCO2B1O94956 709 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 GNAO1P09471 354 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 EBLN1P0CF75 366 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 PRIM2P49643 509 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 EIF2B2P49770 351 aaKnown RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 ERVK-8P63133 956 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 TP53I13Q8NBR0 393 aaPredicted RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 SETD7Q8WTS6 366 aaKnown RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 C12orf43Q96C57 262 aaKnown RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 OR4K3Q96R72 315 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 BBS4Q96RK4 519 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 GABRG3Q99928 467 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 GPR34Q9UPC5 381 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 H6PDO95479 791 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 VSX2P58304 361 aaPredicted RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 ITGADQ13349 1161 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 GPR18Q14330 331 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 NCCRP1Q6ZVX7 275 aaPredicted RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 ERI1Q8IV48 349 aaKnown RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 TCAIMQ8N3R3 496 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 OR8K5Q8NH50 307 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 OR10A6Q8NH74 314 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 SLC37A2Q8TED4 501 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 ZDHHC1Q8WTX9 485 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 SLC13A3Q8WWT9 602 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 FAM162AQ96A26 154 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 FAM120BQ96EK7 910 aaKnown RBP15.25■□□□□ 0.03
PDGFB-201ENST00000331163 MAP4K5Q9Y4K4 846 aa15.25■□□□□ 0.03
PDGFB-201ENST00000331163 BCKDHAP12694 445 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 BLKP51451 505 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 CCR8P51685 355 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 PPP1CAP62136 330 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 FAAH2Q6GMR7 532 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 MMP21Q8N119 569 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 RP9Q8TA86 221 aaKnown RBP15.24■□□□□ 0.03
PDGFB-201ENST00000331163 FAM110BQ8TC76 370 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 RERGQ96A58 199 aaPredicted RBP15.24■□□□□ 0.03
PDGFB-201ENST00000331163 TPD52L3Q96J77 140 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 KCTD14Q9BQ13 255 aaPredicted RBP15.24■□□□□ 0.03
PDGFB-201ENST00000331163 ZNF696Q9H7X3 374 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 WSB2Q9NYS7 404 aaPredicted RBP15.24■□□□□ 0.03
PDGFB-201ENST00000331163 ACACAQ13085 2346 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 EVPLLA8MZ36 301 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 MYO1GB0I1T2 1018 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 KDM1AO60341 852 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 E2F6O75461 281 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 POU2F2P09086 479 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 RAB28P51157 221 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 BTN3A2P78410 334 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 ZP2Q05996 745 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 ZNF423Q2M1K9 1284 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 MINDY4Q4G0A6 757 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 LRRC70Q7Z2Q7 622 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 SPPL2CQ8IUH8 684 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 PDPRQ8NCN5 879 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 VPS37AQ8NEZ2 397 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 EPB41L1Q9H4G0 881 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 BAG5Q9UL15 447 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 USP22Q9UPT9 525 aa15.24■□□□□ 0.03
PDGFB-201ENST00000331163 CELSR3Q9NYQ7 3312 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 PATE3B3GLJ2 98 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 NOL3O60936 208 aaKnown RBP15.23■□□□□ 0.03
PDGFB-201ENST00000331163 C1GALT1C1LP0DN25 315 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 CAPN3P20807 821 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 CMPK1P30085 196 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 CYP27C1Q4G0S4 372 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 C1QTNF12Q5T7M4 302 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 TMEM26Q6ZUK4 368 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 SYT13Q7L8C5 426 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 VPS35Q96QK1 796 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 ACSL6Q9UKU0 697 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 BCAT2O15382 392 aaPredicted RBP15.23■□□□□ 0.03
PDGFB-201ENST00000331163 MPC1LP0DKB6 136 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 NPPBP16860 134 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 FEN1P39748 380 aaKnown RBP15.23■□□□□ 0.03
PDGFB-201ENST00000331163 KIR3DL1P43629 444 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 LEXMQ3ZCV2 418 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 ZFP1Q6P2D0 407 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 ADAMTSL4Q6UY14 1074 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 CLECL1Q8IZS7 167 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 WDR48Q8TAF3 677 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 NELL2Q99435 816 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 NAA50Q9GZZ1 169 aaKnown RBP15.23■□□□□ 0.03
PDGFB-201ENST00000331163 POLR1BQ9H9Y6 1135 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 CPNE7Q9UBL6 633 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 SCML1Q9UN30 329 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 CASC3O15234 703 aaKnown RBP15.23■□□□□ 0.03
PDGFB-201ENST00000331163 GNSP15586 552 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 GSSP48637 474 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 ST13P50502 369 aaKnown RBP15.23■□□□□ 0.03
PDGFB-201ENST00000331163 TPD52P55327 224 aaPredicted RBP15.23■□□□□ 0.03
PDGFB-201ENST00000331163 NUP107P57740 925 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 CD300CQ08708 224 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 PERM1Q5SV97 790 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 METRNLQ641Q3 311 aa15.23■□□□□ 0.03
PDGFB-201ENST00000331163 ZCCHC8Q6NZY4 707 aaKnown RBP15.23■□□□□ 0.03
PDGFB-201ENST00000331163 CHSY3Q70JA7 882 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms