RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 METTL4Q8N3J2 472 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 ANKRD53Q8N9V6 530 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 PCYOX1LQ8NBM8 494 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 CAMKVQ8NCB2 501 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 ZCCHC14Q8WYQ9 949 aaKnown RBP17.23■□□□□ 0.35
SYNE4-201ENST00000324444 RERGQ96A58 199 aaPredicted RBP17.23■□□□□ 0.35
SYNE4-201ENST00000324444 PRR11Q96HE9 360 aaPredicted RBP17.23■□□□□ 0.35
SYNE4-201ENST00000324444 CNDP2Q96KP4 475 aaKnown RBP17.23■□□□□ 0.35
SYNE4-201ENST00000324444 MARK4Q96L34 752 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 APOLD1Q96LR9 279 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 NRTNQ99748 197 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 C1orf50Q9BV19 199 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 MRPL1Q9BYD6 325 aaKnown RBP17.23■□□□□ 0.35
SYNE4-201ENST00000324444 DPY30Q9C005 99 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 ROGDIQ9GZN7 287 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 CHRNA10Q9GZZ6 450 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 ABCG4Q9H172 646 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 SPNS1Q9H2V7 528 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 POLR3HQ9Y535 204 aaPredicted RBP17.23■□□□□ 0.35
SYNE4-201ENST00000324444 PCDHGA4Q9Y5G9 962 aa17.23■□□□□ 0.35
SYNE4-201ENST00000324444 DMXL2Q8TDJ6 3036 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 FEZF1A0PJY2 475 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 ARHGAP10A1A4S6 786 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 TRIM38O00635 465 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 HAT1O14929 419 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 SLC35G6P0C7Q6 338 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 G6PDP11413 515 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 BCKDHAP12694 445 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 MAGP20916 626 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 PRPS1L1P21108 318 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 HNRNPH2P55795 449 aaKnown RBP17.22■□□□□ 0.35
SYNE4-201ENST00000324444 CLDN8P56748 225 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 MXRA7P84157 204 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 TBL3Q12788 808 aaKnown RBP17.22■□□□□ 0.35
SYNE4-201ENST00000324444 CLPPQ16740 277 aaPredicted RBP17.22■□□□□ 0.35
SYNE4-201ENST00000324444 DPY19L1Q2PZI1 675 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 MMEL1Q495T6 779 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 DNAL1Q4LDG9 190 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 ARHGAP24Q8N264 748 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 LIX1Q8N485 282 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 EID2Q8N6I1 236 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 RSC1A1Q92681 617 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 KLHL29Q96CT2 875 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 TCTN2Q96GX1 697 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 APIPQ96GX9 242 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 PRPF18Q99633 342 aaKnown RBP17.22■□□□□ 0.35
SYNE4-201ENST00000324444 ZFYVE21Q9BQ24 234 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 CCDC167Q9P0B6 97 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 GIMAP2Q9UG22 337 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 MCM8Q9UJA3 840 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 NDUFAF1Q9Y375 327 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 COL5A1P20908 1838 aaPredicted RBP17.22■□□□□ 0.35
SYNE4-201ENST00000324444 PCM1Q15154 2024 aa17.22■□□□□ 0.35
SYNE4-201ENST00000324444 A0A088AWK7 358 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 LY6G6EA0A0G2JKS1 128 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 CFAP73A6NFT4 308 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 TLCD2A6NGC4 264 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 GUCY1B2O75343 617 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 LDOC1O95751 146 aaPredicted RBP17.21■□□□□ 0.35
SYNE4-201ENST00000324444 T-ENOLP0DO92 83 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 ZNF10P21506 573 aaPredicted RBP17.21■□□□□ 0.35
SYNE4-201ENST00000324444 ALDH4A1P30038 563 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 TIA1P31483 386 aaKnown RBP eCLIP17.21■□□□□ 0.35
SYNE4-201ENST00000324444 BCL6P41182 706 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 YBX1P67809 324 aaKnown RBP17.21■□□□□ 0.35
SYNE4-201ENST00000324444 SQSTM1Q13501 440 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 ZIC1Q15915 447 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 IRGCQ6NXR0 463 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 ASPGQ86U10 573 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 SNX32Q86XE0 403 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 ZNF761Q86XN6 746 aaPredicted RBP17.21■□□□□ 0.35
SYNE4-201ENST00000324444 C1orf52Q8N6N3 182 aaKnown RBP17.21■□□□□ 0.35
SYNE4-201ENST00000324444 NT5CQ8TCD5 201 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 SLC13A3Q8WWT9 602 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 C11orf24Q96F05 449 aaPredicted RBP17.21■□□□□ 0.35
SYNE4-201ENST00000324444 U3KQA8 63 aa17.21■□□□□ 0.35
SYNE4-201ENST00000324444 SNRNP200O75643 2136 aaKnown RBP17.2■□□□□ 0.34
SYNE4-201ENST00000324444 IGHV1OR21-1A0A087WYE8 117 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 LOC100653049A0A140TA62 436 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 GNG14A0A1W2PPG7 69 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 B2RBV5 119 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 ANGPT2O15123 496 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 GYG2O15488 501 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 CFLARO15519 480 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 ZSCAN9O15535 394 aaPredicted RBP17.2■□□□□ 0.34
SYNE4-201ENST00000324444 NDUFS4O43181 175 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 LCMT2O60294 686 aaKnown RBP17.2■□□□□ 0.34
SYNE4-201ENST00000324444 SRPX2O60687 465 aaPredicted RBP17.2■□□□□ 0.34
SYNE4-201ENST00000324444 KRT34O76011 436 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 IL6P05231 212 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 SERPIND1P05546 499 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 KRT16P08779 473 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 ANXA4P09525 319 aaPredicted RBP17.2■□□□□ 0.34
SYNE4-201ENST00000324444 POLR2JP52435 117 aaKnown RBP17.2■□□□□ 0.34
SYNE4-201ENST00000324444 C21orf58P58505 322 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 TRA2BP62995 288 aaKnown RBP17.2■□□□□ 0.34
SYNE4-201ENST00000324444 DMTNQ08495 405 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 ART3Q13508 389 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 TRIM40Q6P9F5 258 aa17.2■□□□□ 0.34
SYNE4-201ENST00000324444 PAOXQ6QHF9 649 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms