RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 NBPF7P0C2Y1 421 aaPredicted RBP13.41□□□□□ -0.26
TARDBP-230ENST00000639083 MFAP1P55081 439 aaKnown RBP13.41□□□□□ -0.26
TARDBP-230ENST00000639083 AIMP1Q12904 312 aaKnown RBP13.41□□□□□ -0.26
TARDBP-230ENST00000639083 DDX54Q8TDD1 881 aaKnown RBP13.41□□□□□ -0.26
TARDBP-230ENST00000639083 OTUD7AQ8TE49 926 aaPredicted RBP13.41□□□□□ -0.26
TARDBP-230ENST00000639083 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
TARDBP-230ENST00000639083 EXOC6BQ9Y2D4 811 aa13.41□□□□□ -0.26
TARDBP-230ENST00000639083 KSR2Q6VAB6 950 aa13.41□□□□□ -0.26
TARDBP-230ENST00000639083 BTG4Q9NY30 223 aa13.41□□□□□ -0.26
TARDBP-230ENST00000639083 USP16Q9Y5T5 823 aa13.41□□□□□ -0.26
TARDBP-230ENST00000639083 PKD1L3Q7Z443 1732 aa13.4□□□□□ -0.26
TARDBP-230ENST00000639083 SNRPA1P09661 255 aaKnown RBP13.4□□□□□ -0.26
TARDBP-230ENST00000639083 MYL6BP14649 208 aa13.4□□□□□ -0.26
TARDBP-230ENST00000639083 FMNL2Q96PY5 1086 aa13.39□□□□□ -0.27
TARDBP-230ENST00000639083 ABCA3Q99758 1704 aa13.39□□□□□ -0.27
TARDBP-230ENST00000639083 GSPT1P15170 499 aaKnown RBP13.39□□□□□ -0.27
TARDBP-230ENST00000639083 DAXXQ9UER7 740 aaPredicted RBP13.39□□□□□ -0.27
TARDBP-230ENST00000639083 MRC1P22897 1456 aa13.38□□□□□ -0.27
TARDBP-230ENST00000639083 CWF19L2Q2TBE0 894 aaKnown RBP13.38□□□□□ -0.27
TARDBP-230ENST00000639083 ERVV-2B6SEH9 535 aa13.37□□□□□ -0.27
TARDBP-230ENST00000639083 DDX58O95786 925 aaKnown RBP13.37□□□□□ -0.27
TARDBP-230ENST00000639083 PIP4K2AP48426 406 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-230ENST00000639083 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
TARDBP-230ENST00000639083 PPP1R42Q7Z4L9 355 aa13.37□□□□□ -0.27
TARDBP-230ENST00000639083 C22orf23Q9BZE7 217 aa13.37□□□□□ -0.27
TARDBP-230ENST00000639083 TTC22Q5TAA0 569 aa13.37□□□□□ -0.27
TARDBP-230ENST00000639083 COPS6Q7L5N1 327 aa13.37□□□□□ -0.27
TARDBP-230ENST00000639083 SSH3Q8TE77 659 aa13.37□□□□□ -0.27
TARDBP-230ENST00000639083 ROBO1Q9Y6N7 1651 aa13.36□□□□□ -0.27
TARDBP-230ENST00000639083 ALDH1L1O75891 902 aa13.36□□□□□ -0.27
TARDBP-230ENST00000639083 TBC1D9Q6ZT07 1266 aa13.36□□□□□ -0.27
TARDBP-230ENST00000639083 RIC3Q7Z5B4 369 aa13.36□□□□□ -0.27
TARDBP-230ENST00000639083 XAGE3Q8WTP9 111 aa13.36□□□□□ -0.27
TARDBP-230ENST00000639083 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
TARDBP-230ENST00000639083 C9orf78Q9NZ63 289 aaPredicted RBP13.36□□□□□ -0.27
TARDBP-230ENST00000639083 SRGAP3O43295 1099 aa13.36□□□□□ -0.27
TARDBP-230ENST00000639083 LINS1Q8NG48 757 aa13.36□□□□□ -0.27
TARDBP-230ENST00000639083 PARP4Q9UKK3 1724 aaKnown RBP13.35□□□□□ -0.27
TARDBP-230ENST00000639083 IBTKQ9P2D0 1353 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-230ENST00000639083 POLA2Q14181 598 aa13.35□□□□□ -0.27
TARDBP-230ENST00000639083 LRP10Q7Z4F1 713 aa13.35□□□□□ -0.27
TARDBP-230ENST00000639083 N4BP2Q86UW6 1770 aaPredicted RBP13.35□□□□□ -0.27
TARDBP-230ENST00000639083 LTBP4Q8N2S1 1624 aa13.34□□□□□ -0.27
TARDBP-230ENST00000639083 C5P01031 1676 aa13.34□□□□□ -0.27
TARDBP-230ENST00000639083 PTCD1O75127 700 aaKnown RBP13.34□□□□□ -0.27
TARDBP-230ENST00000639083 SURF6O75683 361 aaKnown RBP13.34□□□□□ -0.27
TARDBP-230ENST00000639083 PDE1AP54750 535 aa13.34□□□□□ -0.27
TARDBP-230ENST00000639083 CDC45O75419 566 aa13.33□□□□□ -0.28
TARDBP-230ENST00000639083 IGKV5-2P06315 115 aa13.33□□□□□ -0.28
TARDBP-230ENST00000639083 SDSP20132 328 aa13.33□□□□□ -0.28
TARDBP-230ENST00000639083 ANKRD13DQ6ZTN6 518 aa13.33□□□□□ -0.28
TARDBP-230ENST00000639083 OSBPL3Q9H4L5 887 aa13.33□□□□□ -0.28
TARDBP-230ENST00000639083 GRM8O00222 908 aa13.32□□□□□ -0.28
TARDBP-230ENST00000639083 TSHZ3Q63HK5 1081 aa13.32□□□□□ -0.28
TARDBP-230ENST00000639083 IL1RAPL2Q9NP60 686 aa13.32□□□□□ -0.28
TARDBP-230ENST00000639083 NEXNQ0ZGT2 675 aa13.32□□□□□ -0.28
TARDBP-230ENST00000639083 NBR1Q14596 966 aa13.32□□□□□ -0.28
TARDBP-230ENST00000639083 METTL22Q9BUU2 404 aaPredicted RBP13.32□□□□□ -0.28
TARDBP-230ENST00000639083 AHDC1Q5TGY3 1603 aaPredicted RBP13.31□□□□□ -0.28
TARDBP-230ENST00000639083 ADAMTS2O95450 1211 aa13.31□□□□□ -0.28
TARDBP-230ENST00000639083 BECN1Q14457 450 aa13.31□□□□□ -0.28
TARDBP-230ENST00000639083 MYD88Q99836 296 aa13.31□□□□□ -0.28
TARDBP-230ENST00000639083 SALL3Q9BXA9 1300 aa13.31□□□□□ -0.28
TARDBP-230ENST00000639083 NEURL1BA8MQ27 555 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 NBPF26B4DH59 902 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 RAB11FIP3O75154 756 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 RBM25P49756 843 aaKnown RBP13.3□□□□□ -0.28
TARDBP-230ENST00000639083 PIP4K2BP78356 416 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 MTX1Q13505 466 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 NBPF14Q5TI25 921 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 NBPF10Q6P3W6 841 aaKnown RBP13.3□□□□□ -0.28
TARDBP-230ENST00000639083 NBPF15Q8N660 670 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 SUCLG2Q96I99 432 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 TMOD3Q9NYL9 352 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 HDAC5Q9UQL6 1122 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 A1BGP04217 495 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 MX1P20591 662 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 RHPN1Q8TCX5 695 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 KAZALD1Q96I82 304 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 UTYO14607 1347 aa13.3□□□□□ -0.28
TARDBP-230ENST00000639083 GCKRQ14397 625 aa13.29□□□□□ -0.28
TARDBP-230ENST00000639083 TBC1D2Q9BYX2 928 aa13.29□□□□□ -0.28
TARDBP-230ENST00000639083 PIGBQ92521 554 aa13.29□□□□□ -0.28
TARDBP-230ENST00000639083 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
TARDBP-230ENST00000639083 NUTM1Q86Y26 1132 aa13.28□□□□□ -0.28
TARDBP-230ENST00000639083 KIF1BPQ96EK5 621 aa13.28□□□□□ -0.28
TARDBP-230ENST00000639083 BICC1Q9H694 974 aaKnown RBP13.28□□□□□ -0.28
TARDBP-230ENST00000639083 ASAP1Q9ULH1 1129 aa13.28□□□□□ -0.28
TARDBP-230ENST00000639083 COL14A1Q05707 1796 aaKnown RBP13.28□□□□□ -0.28
TARDBP-230ENST00000639083 GLI3P10071 1580 aa13.28□□□□□ -0.28
TARDBP-230ENST00000639083 ATP5J2-PTCD1G3V325 749 aa13.28□□□□□ -0.28
TARDBP-230ENST00000639083 EXOC5O00471 708 aa13.28□□□□□ -0.28
TARDBP-230ENST00000639083 PLBD2Q8NHP8 589 aa13.28□□□□□ -0.28
TARDBP-230ENST00000639083 STAP2Q9UGK3 403 aa13.28□□□□□ -0.28
TARDBP-230ENST00000639083 PA2G4Q9UQ80 394 aaKnown RBP13.28□□□□□ -0.28
TARDBP-230ENST00000639083 ERBB4Q15303 1308 aa13.27□□□□□ -0.28
TARDBP-230ENST00000639083 NUTM2BA6NNL0 878 aaPredicted RBP13.27□□□□□ -0.28
TARDBP-230ENST00000639083 NUTM2EB1AL46 878 aaPredicted RBP13.27□□□□□ -0.28
TARDBP-230ENST00000639083 MYT1Q01538 1121 aa13.27□□□□□ -0.28
TARDBP-230ENST00000639083 HSP90AB4PQ58FF6 505 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms