RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 ANKRD18BA2A2Z9 1011 aa8.25□□□□□ -1.09
CDK12-202ENST00000447079 RBM5P52756 815 aaKnown RBP eCLIP8.25□□□□□ -1.09
CDK12-202ENST00000447079 RAI14Q9P0K7 980 aa8.25□□□□□ -1.09
CDK12-202ENST00000447079 WDHD1O75717 1129 aaPredicted RBP8.25□□□□□ -1.09
CDK12-202ENST00000447079 TNIP1Q15025 636 aa8.25□□□□□ -1.09
CDK12-202ENST00000447079 LARP1BQ659C4 914 aaKnown RBP8.25□□□□□ -1.09
CDK12-202ENST00000447079 PPP1R42Q7Z4L9 355 aa8.25□□□□□ -1.09
CDK12-202ENST00000447079 RPGRQ92834 1020 aaKnown RBP8.25□□□□□ -1.09
CDK12-202ENST00000447079 DEF6Q9H4E7 631 aa8.25□□□□□ -1.09
CDK12-202ENST00000447079 SPTY2D1Q68D10 685 aaPredicted RBP8.25□□□□□ -1.09
CDK12-202ENST00000447079 CAVIN1Q6NZI2 390 aaKnown RBP8.25□□□□□ -1.09
CDK12-202ENST00000447079 NPATQ14207 1427 aa8.25□□□□□ -1.09
CDK12-202ENST00000447079 FOSBP53539 338 aa8.25□□□□□ -1.09
CDK12-202ENST00000447079 MCM10Q7L590 875 aa8.25□□□□□ -1.09
CDK12-202ENST00000447079 PATL2C9JE40 543 aaKnown RBP8.24□□□□□ -1.09
CDK12-202ENST00000447079 CWC25Q9NXE8 425 aaPredicted RBP8.24□□□□□ -1.09
CDK12-202ENST00000447079 FLT4P35916 1363 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 ZMYND15Q9H091 742 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 POLR3AO14802 1390 aaPredicted RBP8.24□□□□□ -1.09
CDK12-202ENST00000447079 TRIM5Q9C035 493 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 EHMT1Q9H9B1 1298 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 ADCY10Q96PN6 1610 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 SNRPA1P09661 255 aaKnown RBP8.24□□□□□ -1.09
CDK12-202ENST00000447079 DESP17661 470 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 XPCQ01831 940 aaPredicted RBP8.24□□□□□ -1.09
CDK12-202ENST00000447079 TMEM132AQ24JP5 1023 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 SSH1Q8WYL5 1049 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 ME1P48163 572 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 EVI5LQ96CN4 794 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 TNMDQ9H2S6 317 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 ABCA8O94911 1581 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 FOXO3O43524 673 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 TOM1O60784 492 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 SMARCC1Q92922 1105 aaPredicted RBP8.24□□□□□ -1.09
CDK12-202ENST00000447079 TET3O43151 1660 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 SMC2O95347 1197 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 CWC27Q6UX04 472 aaKnown RBP8.24□□□□□ -1.09
CDK12-202ENST00000447079 RAB34Q9BZG1 259 aa8.24□□□□□ -1.09
CDK12-202ENST00000447079 COL17A1Q9UMD9 1497 aaPredicted RBP8.23□□□□□ -1.09
CDK12-202ENST00000447079 ATP2B2Q01814 1243 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 ZSCAN30Q86W11 494 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 PYM1Q9BRP8 204 aaKnown RBP8.23□□□□□ -1.09
CDK12-202ENST00000447079 ANKIB1Q9P2G1 1089 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 SMTNL1A8MU46 457 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 ZGPATQ8N5A5 531 aaKnown RBP8.23□□□□□ -1.09
CDK12-202ENST00000447079 NGLY1Q96IV0 654 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 JAKMIP1Q96N16 626 aaKnown RBP8.23□□□□□ -1.09
CDK12-202ENST00000447079 HMG20BQ9P0W2 317 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 SPHKAPQ2M3C7 1700 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 FLIIQ13045 1269 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 DZIP1Q86YF9 867 aaKnown RBP8.23□□□□□ -1.09
CDK12-202ENST00000447079 YTHDC2Q9H6S0 1430 aaKnown RBP8.23□□□□□ -1.09
CDK12-202ENST00000447079 IQCEQ6IPM2 695 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 IQCA1Q86XH1 822 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 CEP57L1Q8IYX8 460 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 NAPBQ9H115 298 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 MYD88Q99836 296 aa8.23□□□□□ -1.09
CDK12-202ENST00000447079 SAMD1Q6SPF0 538 aaPredicted RBP8.22□□□□□ -1.09
CDK12-202ENST00000447079 ANKRD24Q8TF21 1146 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 PARD3Q8TEW0 1356 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 IDH1O75874 414 aaKnown RBP8.22□□□□□ -1.09
CDK12-202ENST00000447079 CASTP20810 708 aaKnown RBP8.22□□□□□ -1.09
CDK12-202ENST00000447079 CAGE1Q8TC20 777 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 GSTO1P78417 241 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 ST5P78524 1137 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 CCDC178Q5BJE1 867 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 PDILTQ8N807 584 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 CCDC12Q8WUD4 166 aaPredicted RBP8.22□□□□□ -1.09
CDK12-202ENST00000447079 SPATA32Q96LK8 384 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 HSP90AB2PQ58FF8 381 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 PPFIBP1Q86W92 1011 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 ZSCAN29Q8IWY8 852 aaPredicted RBP8.22□□□□□ -1.09
CDK12-202ENST00000447079 EDC4Q6P2E9 1401 aaKnown RBP8.22□□□□□ -1.09
CDK12-202ENST00000447079 ZMYM3Q14202 1370 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 FIBPO43427 364 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 PPP1R12BO60237 982 aaPredicted RBP8.22□□□□□ -1.09
CDK12-202ENST00000447079 USP5P45974 858 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 NPC1L1Q9UHC9 1359 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 ERLIN2O94905 339 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 LDHCP07864 332 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 NUP133Q8WUM0 1156 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 MPRIPQ6WCQ1 1025 aa8.22□□□□□ -1.09
CDK12-202ENST00000447079 CROCC2H7BZ55 1655 aa8.21□□□□□ -1.09
CDK12-202ENST00000447079 BAG3O95817 575 aa8.21□□□□□ -1.09
CDK12-202ENST00000447079 PDE4CQ08493 712 aa8.21□□□□□ -1.09
CDK12-202ENST00000447079 CCDC112Q8NEF3 446 aa8.21□□□□□ -1.09
CDK12-202ENST00000447079 TRMT112Q9UI30 125 aaKnown RBP8.21□□□□□ -1.09
CDK12-202ENST00000447079 FGFR1OPO95684 399 aaKnown RBP8.21□□□□□ -1.09
CDK12-202ENST00000447079 PRPF40AO75400 957 aaKnown RBP8.21□□□□□ -1.1
CDK12-202ENST00000447079 EMILIN1Q9Y6C2 1016 aa8.21□□□□□ -1.1
CDK12-202ENST00000447079 TRAF1Q13077 416 aa8.21□□□□□ -1.1
CDK12-202ENST00000447079 CALCOCO1Q9P1Z2 691 aa8.21□□□□□ -1.1
CDK12-202ENST00000447079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.21□□□□□ -1.15e-9■□□□□ 9.7
CDK12-202ENST00000447079 SYNMO15061 1565 aa8.21□□□□□ -1.1
CDK12-202ENST00000447079 PTCD1O75127 700 aaKnown RBP8.21□□□□□ -1.1
CDK12-202ENST00000447079 AKAP4Q5JQC9 854 aa8.21□□□□□ -1.1
CDK12-202ENST00000447079 SCAND2PQ9GZW5 306 aaPredicted RBP8.21□□□□□ -1.1
CDK12-202ENST00000447079 BABAM1Q9NWV8 329 aa8.21□□□□□ -1.1
CDK12-202ENST00000447079 PZPP20742 1482 aa8.21□□□□□ -1.1
CDK12-202ENST00000447079 CCDC152Q4G0S7 254 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms