RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 CEBPAP49715 358 aaPredicted RBP17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 KLHL40Q2TBA0 621 aa17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 AOX1Q06278 1338 aa17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 CBFA2T2O43439 604 aa17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 CCDC69A6NI79 296 aa17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 PDE1AP54750 535 aa17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 MPRIPQ6WCQ1 1025 aa17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 BRPF3Q9ULD4 1205 aa17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 NPHP3Q7Z494 1330 aa17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 PLEKHG3A1L390 1219 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 TULP1O00294 542 aaPredicted RBP17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 PES1O00541 588 aaKnown RBP17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 CTAGE5O15320 804 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 CAVIN2O95810 425 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 FILIP1LQ4L180 1135 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 RHPN1Q8TCX5 695 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 EPB41L2O43491 1005 aaKnown RBP17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 MAP4K4O95819 1239 aaPredicted RBP17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 CREBRFQ8IUR6 639 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 MAP3K2Q9Y2U5 619 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 ESPNB1AK53 854 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 FOXO3O43524 673 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 FAM13BQ9NYF5 915 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 NOL7Q9UMY1 257 aaKnown RBP17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 IGHMBP2P38935 993 aaKnown RBP17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 CEP57L1Q8IYX8 460 aa17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 TRMT2AQ8IZ69 625 aaKnown RBP17.46■□□□□ 0.39
AP000550.1-201ENST00000420508 MAP3K11Q16584 847 aa17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 A0A0U1RQG5 324 aaPredicted RBP17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 PRPF40BQ6NWY9 871 aaKnown RBP17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 ZSCAN30Q86W11 494 aa17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 PLA2R1Q13018 1463 aa17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 RTL1A6NKG5 1358 aa17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 MCM5P33992 734 aa17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 KSR2Q6VAB6 950 aa17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 RLBP1P12271 317 aa17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 SDSP20132 328 aa17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 MEX3CQ5U5Q3 659 aaKnown RBP17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 MAP3K4Q9Y6R4 1608 aa17.45■□□□□ 0.38
AP000550.1-201ENST00000420508 TMEM2Q9UHN6 1383 aa17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 CEP85Q6P2H3 762 aa17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 USHBP1Q8N6Y0 703 aa17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 MEIS3Q99687 375 aa17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 IFIT1P09914 478 aaKnown RBP17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 TTF1Q15361 905 aaPredicted RBP17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 NOC3LQ8WTT2 800 aaKnown RBP17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 MSH6P52701 1360 aa17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 MTHFSDQ2M296 383 aaKnown RBP17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 ACBD3Q9H3P7 528 aa17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 CEP131Q9UPN4 1083 aa17.44■□□□□ 0.38
AP000550.1-201ENST00000420508 SMTNL1A8MU46 457 aa17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 ZBTB7BO15156 539 aaPredicted RBP17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 ME1P48163 572 aa17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 UVSSAQ2YD98 709 aa17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 IP6K1Q92551 441 aa17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 SMARCE1Q969G3 411 aa17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 RAD50Q92878 1312 aa17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 ESYT1Q9BSJ8 1104 aa17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 CWC25Q9NXE8 425 aaPredicted RBP17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 TRIM35Q9UPQ4 493 aa17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 CCDC196A0A1B0GTZ2 297 aa17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 FKBP4Q02790 459 aaKnown RBP eCLIP17.43■□□□□ 0.38
AP000550.1-201ENST00000420508 IFIT5Q13325 482 aaKnown RBP17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 CEP89Q96ST8 783 aa17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 DDX19AQ9NUU7 478 aaKnown RBP17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 SPHKAPQ2M3C7 1700 aa17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 RBM25P49756 843 aaKnown RBP17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 SKAP1Q86WV1 359 aa17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 LINS1Q8NG48 757 aa17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 ZNF592Q92610 1267 aa17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 CHL1O00533 1208 aa17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 CLSTN1O94985 981 aa17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 BAG4O95429 457 aaKnown RBP17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 METTL24Q5JXM2 366 aa17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 MNS1Q8NEH6 495 aa17.42■□□□□ 0.38
AP000550.1-201ENST00000420508 XPCQ01831 940 aaPredicted RBP17.41■□□□□ 0.38
AP000550.1-201ENST00000420508 TEX35Q5T0J7 233 aa17.41■□□□□ 0.38
AP000550.1-201ENST00000420508 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
AP000550.1-201ENST00000420508 ZFYP08048 801 aaPredicted RBP17.41■□□□□ 0.38
AP000550.1-201ENST00000420508 A0A087WZG4 1122 aa17.41■□□□□ 0.38
AP000550.1-201ENST00000420508 FOSBP53539 338 aa17.41■□□□□ 0.38
AP000550.1-201ENST00000420508 VPS53Q5VIR6 699 aa17.41■□□□□ 0.38
AP000550.1-201ENST00000420508 ZNF521Q96K83 1311 aa17.41■□□□□ 0.38
AP000550.1-201ENST00000420508 KIF2AO00139 706 aaPredicted RBP17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 SSFA2P28290 1259 aa17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 INTS4Q96HW7 963 aaKnown RBP17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 R3HCC1Q9Y3T6 440 aaKnown RBP17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 MAP3K19Q56UN5 1328 aa17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 ABCC3O15438 1527 aa17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 HOXC9P31274 260 aa17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 BRPF1P55201 1214 aaPredicted RBP17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 AIDAQ96BJ3 306 aa17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 PHACTR3Q96KR7 559 aa17.4■□□□□ 0.38
AP000550.1-201ENST00000420508 BOLA2Q9H3K6 86 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms