RNA–Protein interactions for RNA: ENST00000407418.7

CBX6-202, Transcript of chromobox 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CBX6, Length 6,122 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-202ENST00000407418 MBD3O95983 291 aa19.33■□□□□ 0.69
CBX6-202ENST00000407418 TTLL5Q6EMB2 1281 aa19.33■□□□□ 0.69
CBX6-202ENST00000407418 RIMS2Q9UQ26 1411 aa19.33■□□□□ 0.69
CBX6-202ENST00000407418 RANBP6O60518 1105 aaKnown RBP19.33■□□□□ 0.68
CBX6-202ENST00000407418 ARGLU1Q9NWB6 273 aaPredicted RBP19.33■□□□□ 0.68
CBX6-202ENST00000407418 NCKAP5LQ9HCH0 1330 aa19.33■□□□□ 0.68
CBX6-202ENST00000407418 SEPT11Q9NVA2 429 aaKnown RBP19.33■□□□□ 0.68
CBX6-202ENST00000407418 C14orf93Q9H972 538 aaKnown RBP19.32■□□□□ 0.68
CBX6-202ENST00000407418 DCTN1Q14203 1278 aa19.32■□□□□ 0.68
CBX6-202ENST00000407418 SCAF11Q99590 1463 aaKnown RBP19.32■□□□□ 0.68
CBX6-202ENST00000407418 LMOD1P29536 600 aaPredicted RBP19.32■□□□□ 0.68
CBX6-202ENST00000407418 OGFOD1Q8N543 542 aa19.32■□□□□ 0.68
CBX6-202ENST00000407418 STK32BQ9NY57 414 aa19.32■□□□□ 0.68
CBX6-202ENST00000407418 DHX8Q14562 1220 aaKnown RBP19.32■□□□□ 0.68
CBX6-202ENST00000407418 ALDH1L2Q3SY69 923 aa19.32■□□□□ 0.68
CBX6-202ENST00000407418 ERLIN2O94905 339 aa19.31■□□□□ 0.68
CBX6-202ENST00000407418 ZGPATQ8N5A5 531 aaKnown RBP19.31■□□□□ 0.68
CBX6-202ENST00000407418 RAB34Q9BZG1 259 aa19.31■□□□□ 0.68
CBX6-202ENST00000407418 A2MP01023 1474 aa19.31■□□□□ 0.68
CBX6-202ENST00000407418 LARP1BQ659C4 914 aaKnown RBP19.31■□□□□ 0.68
CBX6-202ENST00000407418 PPFIBP1Q86W92 1011 aa19.31■□□□□ 0.68
CBX6-202ENST00000407418 CCDC150Q8NCX0 1101 aa19.31■□□□□ 0.68
CBX6-202ENST00000407418 TMEM266Q2M3C6 531 aa19.31■□□□□ 0.68
CBX6-202ENST00000407418 PPP4R3BQ5MIZ7 849 aa19.31■□□□□ 0.68
CBX6-202ENST00000407418 C19orf44Q9H6X5 657 aa19.3■□□□□ 0.68
CBX6-202ENST00000407418 WDR33Q9C0J8 1336 aaKnown RBP19.3■□□□□ 0.68
CBX6-202ENST00000407418 RAPGEF6Q8TEU7 1601 aa19.3■□□□□ 0.68
CBX6-202ENST00000407418 ANKRD18AQ8IVF6 992 aa19.3■□□□□ 0.68
CBX6-202ENST00000407418 DRC1Q96MC2 740 aa19.3■□□□□ 0.68
CBX6-202ENST00000407418 MAP3K2Q9Y2U5 619 aa19.3■□□□□ 0.68
CBX6-202ENST00000407418 FIBPO43427 364 aa19.3■□□□□ 0.68
CBX6-202ENST00000407418 SERPINC1P01008 464 aa19.3■□□□□ 0.68
CBX6-202ENST00000407418 UHRF1BP1Q6BDS2 1440 aa19.3■□□□□ 0.68
CBX6-202ENST00000407418 BAG4O95429 457 aaKnown RBP19.29■□□□□ 0.68
CBX6-202ENST00000407418 TRIM5Q9C035 493 aa19.29■□□□□ 0.68
CBX6-202ENST00000407418 PHAXQ9H814 394 aaKnown RBP19.29■□□□□ 0.68
CBX6-202ENST00000407418 CCDC39Q9UFE4 941 aa19.29■□□□□ 0.68
CBX6-202ENST00000407418 RTCBQ9Y3I0 505 aaKnown RBP19.29■□□□□ 0.68
CBX6-202ENST00000407418 PLCH2O75038 1416 aa19.29■□□□□ 0.68
CBX6-202ENST00000407418 PDE4BQ07343 736 aa19.29■□□□□ 0.68
CBX6-202ENST00000407418 JDP2Q8WYK2 163 aa19.29■□□□□ 0.68
CBX6-202ENST00000407418 IL2RBP14784 551 aa19.29■□□□□ 0.68
CBX6-202ENST00000407418 KRT85P78386 507 aa19.29■□□□□ 0.68
CBX6-202ENST00000407418 LDHAL6AQ6ZMR3 332 aa19.29■□□□□ 0.68
CBX6-202ENST00000407418 PDIA4P13667 645 aaKnown RBP19.29■□□□□ 0.68
CBX6-202ENST00000407418 ERCC4Q92889 916 aaPredicted RBP19.29■□□□□ 0.68
CBX6-202ENST00000407418 CFAP45Q9UL16 551 aa19.29■□□□□ 0.68
CBX6-202ENST00000407418 CCDC12Q8WUD4 166 aaPredicted RBP19.28■□□□□ 0.68
CBX6-202ENST00000407418 HSPA2P54652 639 aa19.28■□□□□ 0.68
CBX6-202ENST00000407418 THUMPD2Q9BTF0 503 aaKnown RBP19.28■□□□□ 0.68
CBX6-202ENST00000407418 CATIPQ7Z7H3 387 aa19.28■□□□□ 0.68
CBX6-202ENST00000407418 NLRP3Q96P20 1036 aa19.28■□□□□ 0.68
CBX6-202ENST00000407418 DUOX2Q9NRD8 1548 aa19.28■□□□□ 0.68
CBX6-202ENST00000407418 PTPRCP08575 1304 aa19.28■□□□□ 0.68
CBX6-202ENST00000407418 ZNF213O14771 459 aa19.27■□□□□ 0.68
CBX6-202ENST00000407418 UQCRFS1P1P0C7P4 283 aa19.27■□□□□ 0.68
CBX6-202ENST00000407418 MX1P20591 662 aa19.27■□□□□ 0.68
CBX6-202ENST00000407418 PPM1FP49593 454 aaPredicted RBP19.27■□□□□ 0.68
CBX6-202ENST00000407418 ZNF804AQ7Z570 1209 aa19.27■□□□□ 0.68
CBX6-202ENST00000407418 BOLA2Q9H3K6 86 aa19.27■□□□□ 0.68
CBX6-202ENST00000407418 CBFA2T2O43439 604 aa19.27■□□□□ 0.68
CBX6-202ENST00000407418 SLC12A7Q9Y666 1083 aa19.27■□□□□ 0.68
CBX6-202ENST00000407418 TSPY26PQ9H489 355 aa19.27■□□□□ 0.67
CBX6-202ENST00000407418 HMGB1P09429 215 aaKnown RBP19.27■□□□□ 0.67
CBX6-202ENST00000407418 TSG101Q99816 390 aa19.27■□□□□ 0.67
CBX6-202ENST00000407418 CRNKL1Q9BZJ0 848 aaKnown RBP19.27■□□□□ 0.67
CBX6-202ENST00000407418 PIK3R4Q99570 1358 aa19.26■□□□□ 0.67
CBX6-202ENST00000407418 ANKRD36BQ8N2N9 1353 aa19.26■□□□□ 0.67
CBX6-202ENST00000407418 CDCA7Q9BWT1 371 aaPredicted RBP19.26■□□□□ 0.67
CBX6-202ENST00000407418 EXOC6BQ9Y2D4 811 aa19.26■□□□□ 0.67
CBX6-202ENST00000407418 ITSN2Q9NZM3 1697 aa19.25■□□□□ 0.67
CBX6-202ENST00000407418 KIF5BP33176 963 aa19.25■□□□□ 0.67
CBX6-202ENST00000407418 VTI1AQ96AJ9 217 aa19.25■□□□□ 0.67
CBX6-202ENST00000407418 TMEM57Q8N5G2 664 aa19.25■□□□□ 0.67
CBX6-202ENST00000407418 TNMDQ9H2S6 317 aa19.25■□□□□ 0.67
CBX6-202ENST00000407418 ZRSR2Q15696 482 aaKnown RBP19.24■□□□□ 0.67
CBX6-202ENST00000407418 UTP14AQ9BVJ6 771 aaKnown RBP19.24■□□□□ 0.67
CBX6-202ENST00000407418 TRAF1Q13077 416 aa19.24■□□□□ 0.67
CBX6-202ENST00000407418 PPIP5K1Q6PFW1 1433 aa19.24■□□□□ 0.67
CBX6-202ENST00000407418 HSP90B2PQ58FF3 399 aa19.24■□□□□ 0.67
CBX6-202ENST00000407418 EYA3Q99504 573 aa19.24■□□□□ 0.67
CBX6-202ENST00000407418 KAT14Q9H8E8 782 aa19.24■□□□□ 0.67
CBX6-202ENST00000407418 CASTP20810 708 aaKnown RBP19.23■□□□□ 0.67
CBX6-202ENST00000407418 NFKBIBQ15653 356 aa19.23■□□□□ 0.67
CBX6-202ENST00000407418 EIF4G3O43432 1585 aaKnown RBP19.23■□□□□ 0.67
CBX6-202ENST00000407418 SSRP1Q08945 709 aaKnown RBP19.23■□□□□ 0.67
CBX6-202ENST00000407418 SPATA32Q96LK8 384 aa19.23■□□□□ 0.67
CBX6-202ENST00000407418 CCDC178Q5BJE1 867 aa19.23■□□□□ 0.67
CBX6-202ENST00000407418 NIP7Q9Y221 180 aaKnown RBP eCLIP19.22■□□□□ 0.67
CBX6-202ENST00000407418 MTERF4Q7Z6M4 381 aaKnown RBP19.22■□□□□ 0.67
CBX6-202ENST00000407418 ATP5J2-PTCD1G3V325 749 aa19.22■□□□□ 0.67
CBX6-202ENST00000407418 CCDC8Q9H0W5 538 aaPredicted RBP19.22■□□□□ 0.67
CBX6-202ENST00000407418 CWC15Q9P013 229 aaKnown RBP19.22■□□□□ 0.67
CBX6-202ENST00000407418 LRRFIP2Q9Y608 721 aaKnown RBP19.22■□□□□ 0.67
CBX6-202ENST00000407418 CCDC194A0A1B0GVG4 234 aa19.22■□□□□ 0.67
CBX6-202ENST00000407418 B4DLN1 442 aa19.22■□□□□ 0.67
CBX6-202ENST00000407418 MRE11P49959 708 aa19.22■□□□□ 0.67
CBX6-202ENST00000407418 MRPL12P52815 198 aaKnown RBP19.22■□□□□ 0.67
CBX6-202ENST00000407418 NLRP5P59047 1200 aa19.22■□□□□ 0.67
CBX6-202ENST00000407418 TPTE2Q6XPS3 522 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms