RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 LIMCH1Q9UPQ0 1083 aa16.87■□□□□ 0.29
SPPL3-201ENST00000353487 FANCAO15360 1455 aa16.86■□□□□ 0.29
SPPL3-201ENST00000353487 TSR1Q2NL82 804 aaKnown RBP16.86■□□□□ 0.29
SPPL3-201ENST00000353487 SRCIN1Q9C0H9 1055 aa16.86■□□□□ 0.29
SPPL3-201ENST00000353487 ABCC11Q96J66 1382 aa16.86■□□□□ 0.29
SPPL3-201ENST00000353487 EIF3JO75822 258 aaKnown RBP16.86■□□□□ 0.29
SPPL3-201ENST00000353487 PHACTR3Q96KR7 559 aa16.86■□□□□ 0.29
SPPL3-201ENST00000353487 ARHGEF12Q9NZN5 1544 aa16.86■□□□□ 0.29
SPPL3-201ENST00000353487 SRGAP3O43295 1099 aa16.86■□□□□ 0.29
SPPL3-201ENST00000353487 SYTL4Q96C24 671 aaPredicted RBP16.86■□□□□ 0.29
SPPL3-201ENST00000353487 CDK19Q9BWU1 502 aa16.86■□□□□ 0.29
SPPL3-201ENST00000353487 TRIM35Q9UPQ4 493 aa16.86■□□□□ 0.29
SPPL3-201ENST00000353487 DCTPP1Q9H773 170 aa16.85■□□□□ 0.29
SPPL3-201ENST00000353487 TTC37Q6PGP7 1564 aa16.85■□□□□ 0.29
SPPL3-201ENST00000353487 TPM1P09493 284 aa16.85■□□□□ 0.29
SPPL3-201ENST00000353487 ESYT1Q9BSJ8 1104 aa16.85■□□□□ 0.29
SPPL3-201ENST00000353487 ADGRL1O94910 1474 aa16.85■□□□□ 0.29
SPPL3-201ENST00000353487 GTF2E1P29083 439 aaPredicted RBP16.85■□□□□ 0.29
SPPL3-201ENST00000353487 ATP2B3Q16720 1220 aa16.85■□□□□ 0.29
SPPL3-201ENST00000353487 DNAJC25Q9H1X3 360 aa16.85■□□□□ 0.29
SPPL3-201ENST00000353487 DACT1Q9NYF0 836 aa16.85■□□□□ 0.29
SPPL3-201ENST00000353487 CAPN2P17655 700 aa16.85■□□□□ 0.29
SPPL3-201ENST00000353487 ADGBQ8N7X0 1667 aa16.84■□□□□ 0.29
SPPL3-201ENST00000353487 LRMPQ12912 555 aa16.84■□□□□ 0.29
SPPL3-201ENST00000353487 RASSF8Q8NHQ8 419 aa16.84■□□□□ 0.29
SPPL3-201ENST00000353487 RNF187Q5TA31 235 aaPredicted RBP16.84■□□□□ 0.29
SPPL3-201ENST00000353487 ERCC4Q92889 916 aaPredicted RBP16.84■□□□□ 0.29
SPPL3-201ENST00000353487 PYCARDQ9ULZ3 195 aa16.84■□□□□ 0.29
SPPL3-201ENST00000353487 INSRP06213 1382 aa16.84■□□□□ 0.29
SPPL3-201ENST00000353487 SERPINC1P01008 464 aa16.83■□□□□ 0.29
SPPL3-201ENST00000353487 DHX8Q14562 1220 aaKnown RBP16.83■□□□□ 0.29
SPPL3-201ENST00000353487 TXLNBQ8N3L3 684 aa16.83■□□□□ 0.29
SPPL3-201ENST00000353487 ANKRD44Q8N8A2 993 aa16.83■□□□□ 0.29
SPPL3-201ENST00000353487 NGDNQ8NEJ9 315 aaKnown RBP16.83■□□□□ 0.28
SPPL3-201ENST00000353487 NAT10Q9H0A0 1025 aaKnown RBP16.83■□□□□ 0.28
SPPL3-201ENST00000353487 RNF216Q9NWF9 866 aaPredicted RBP16.83■□□□□ 0.28
SPPL3-201ENST00000353487 SKILP12757 684 aa16.83■□□□□ 0.28
SPPL3-201ENST00000353487 CCT4P50991 539 aaKnown RBP16.83■□□□□ 0.28
SPPL3-201ENST00000353487 KLHL34Q8N239 644 aa16.83■□□□□ 0.28
SPPL3-201ENST00000353487 FAM200AQ8TCP9 573 aa16.83■□□□□ 0.28
SPPL3-201ENST00000353487 SIL1Q9H173 461 aa16.83■□□□□ 0.28
SPPL3-201ENST00000353487 CFAP65Q6ZU64 1925 aaKnown RBP16.82■□□□□ 0.28
SPPL3-201ENST00000353487 GUCY1B3Q02153 619 aa16.82■□□□□ 0.28
SPPL3-201ENST00000353487 BLOC1S2Q6QNY1 142 aa16.82■□□□□ 0.28
SPPL3-201ENST00000353487 IPO7O95373 1038 aaKnown RBP16.82■□□□□ 0.28
SPPL3-201ENST00000353487 AIMP1Q12904 312 aaKnown RBP16.82■□□□□ 0.28
SPPL3-201ENST00000353487 NUTM2GQ5VZR2 741 aa16.82■□□□□ 0.28
SPPL3-201ENST00000353487 PCMTD1Q96MG8 357 aaPredicted RBP16.82■□□□□ 0.28
SPPL3-201ENST00000353487 A0A0G2JS52 829 aa16.82■□□□□ 0.28
SPPL3-201ENST00000353487 RAB11FIP3O75154 756 aa16.82■□□□□ 0.28
SPPL3-201ENST00000353487 SYT1P21579 422 aa16.82■□□□□ 0.28
SPPL3-201ENST00000353487 G3BP1Q13283 466 aaKnown RBP eCLIP16.82■□□□□ 0.28
SPPL3-201ENST00000353487 TRHP20396 242 aaPredicted RBP16.81■□□□□ 0.28
SPPL3-201ENST00000353487 NEK11Q8NG66 645 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 ZNF330Q9Y3S2 320 aaPredicted RBP16.81■□□□□ 0.28
SPPL3-201ENST00000353487 CLGNO14967 610 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 ERLIN1O75477 346 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 PSMA5P28066 241 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 RRP12Q5JTH9 1297 aaKnown RBP16.81■□□□□ 0.28
SPPL3-201ENST00000353487 BIN1O00499 593 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 F13A1P00488 732 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 FAM69CQ0P6D2 419 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 UTP14CQ5TAP6 766 aaKnown RBP16.81■□□□□ 0.28
SPPL3-201ENST00000353487 ISM2Q6H9L7 571 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 FAM107BQ9H098 131 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 ABCC2Q92887 1545 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 TYRO3Q06418 890 aa16.81■□□□□ 0.28
SPPL3-201ENST00000353487 FBXO31Q5XUX0 539 aaPredicted RBP16.81■□□□□ 0.28
SPPL3-201ENST00000353487 NCBP3Q53F19 620 aaKnown RBP16.8■□□□□ 0.28
SPPL3-201ENST00000353487 DYDC1Q8WWB3 177 aa16.8■□□□□ 0.28
SPPL3-201ENST00000353487 PALD1Q9ULE6 856 aa16.8■□□□□ 0.28
SPPL3-201ENST00000353487 CPLX1O14810 134 aa16.8■□□□□ 0.28
SPPL3-201ENST00000353487 FYB1O15117 783 aa16.8■□□□□ 0.28
SPPL3-201ENST00000353487 NAP1L1P55209 391 aaKnown RBP16.8■□□□□ 0.28
SPPL3-201ENST00000353487 CEP85Q6P2H3 762 aa16.8■□□□□ 0.28
SPPL3-201ENST00000353487 E2F4Q16254 413 aa16.8■□□□□ 0.28
SPPL3-201ENST00000353487 CEP57Q86XR8 500 aa16.8■□□□□ 0.28
SPPL3-201ENST00000353487 RABEP2Q9H5N1 569 aa16.8■□□□□ 0.28
SPPL3-201ENST00000353487 ATP2C2O75185 946 aa16.79■□□□□ 0.28
SPPL3-201ENST00000353487 NME9Q86XW9 330 aa16.79■□□□□ 0.28
SPPL3-201ENST00000353487 PAXBP1Q9Y5B6 917 aa16.79■□□□□ 0.28
SPPL3-201ENST00000353487 DUOX2Q9NRD8 1548 aa16.79■□□□□ 0.28
SPPL3-201ENST00000353487 SFPQP23246 707 aaKnown RBP eCLIP16.79■□□□□ 0.28
SPPL3-201ENST00000353487 AK2P54819 239 aa16.79■□□□□ 0.28
SPPL3-201ENST00000353487 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
SPPL3-201ENST00000353487 NOS1P29475 1434 aa16.79■□□□□ 0.28
SPPL3-201ENST00000353487 BRD1O95696 1058 aa16.79■□□□□ 0.28
SPPL3-201ENST00000353487 ARHGAP29Q52LW3 1261 aa16.79■□□□□ 0.28
SPPL3-201ENST00000353487 ZNF397Q8NF99 534 aaPredicted RBP16.78■□□□□ 0.28
SPPL3-201ENST00000353487 SYNE3Q6ZMZ3 975 aa16.78■□□□□ 0.28
SPPL3-201ENST00000353487 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
SPPL3-201ENST00000353487 LIG1P18858 919 aa16.78■□□□□ 0.28
SPPL3-201ENST00000353487 BRD2P25440 801 aaKnown RBP16.78■□□□□ 0.28
SPPL3-201ENST00000353487 GABPB1Q06547 395 aaPredicted RBP16.78■□□□□ 0.28
SPPL3-201ENST00000353487 IDI1Q13907 227 aa16.78■□□□□ 0.28
SPPL3-201ENST00000353487 NAA30Q147X3 362 aaPredicted RBP16.78■□□□□ 0.28
SPPL3-201ENST00000353487 STK38Q15208 465 aa16.78■□□□□ 0.28
SPPL3-201ENST00000353487 ELF2Q15723 593 aa16.78■□□□□ 0.28
SPPL3-201ENST00000353487 CCDC30Q5VVM6 783 aa16.78■□□□□ 0.28
SPPL3-201ENST00000353487 IL16Q14005 1332 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms