RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 MAP3K2Q9Y2U5 619 aa18.06■□□□□ 0.48
SHCBP1-201ENST00000303383 HEG1Q9ULI3 1381 aa18.06■□□□□ 0.48
SHCBP1-201ENST00000303383 RIC3Q7Z5B4 369 aa18.06■□□□□ 0.48
SHCBP1-201ENST00000303383 CCDC9Q9Y3X0 531 aaKnown RBP18.06■□□□□ 0.48
SHCBP1-201ENST00000303383 PXDNLA1KZ92 1463 aa18.06■□□□□ 0.48
SHCBP1-201ENST00000303383 ADAMTS7Q9UKP4 1686 aa18.06■□□□□ 0.48
SHCBP1-201ENST00000303383 KSR2Q6VAB6 950 aa18.05■□□□□ 0.48
SHCBP1-201ENST00000303383 LRRFIP2Q9Y608 721 aaKnown RBP18.05■□□□□ 0.48
SHCBP1-201ENST00000303383 SIPA1L3O60292 1781 aaPredicted RBP18.05■□□□□ 0.48
SHCBP1-201ENST00000303383 TMOD3Q9NYL9 352 aa18.05■□□□□ 0.48
SHCBP1-201ENST00000303383 C9orf78Q9NZ63 289 aaPredicted RBP18.05■□□□□ 0.48
SHCBP1-201ENST00000303383 IPO9Q96P70 1041 aaKnown RBP18.04■□□□□ 0.48
SHCBP1-201ENST00000303383 ATP10DQ9P241 1426 aa18.04■□□□□ 0.48
SHCBP1-201ENST00000303383 PHLPP1O60346 1717 aa18.04■□□□□ 0.48
SHCBP1-201ENST00000303383 COL14A1Q05707 1796 aaKnown RBP18.04■□□□□ 0.48
SHCBP1-201ENST00000303383 NEXNQ0ZGT2 675 aa18.04■□□□□ 0.48
SHCBP1-201ENST00000303383 USP44Q9H0E7 712 aa18.04■□□□□ 0.48
SHCBP1-201ENST00000303383 EXOC5O00471 708 aa18.03■□□□□ 0.48
SHCBP1-201ENST00000303383 PTCD1O75127 700 aaKnown RBP18.03■□□□□ 0.48
SHCBP1-201ENST00000303383 USP16Q9Y5T5 823 aa18.03■□□□□ 0.48
SHCBP1-201ENST00000303383 KAT6BQ8WYB5 2073 aa18.03■□□□□ 0.48
SHCBP1-201ENST00000303383 HDAC5Q9UQL6 1122 aa18.03■□□□□ 0.48
SHCBP1-201ENST00000303383 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
SHCBP1-201ENST00000303383 A0A0G2JS52 829 aa18.02■□□□□ 0.48
SHCBP1-201ENST00000303383 BEND3Q5T5X7 828 aa18.02■□□□□ 0.48
SHCBP1-201ENST00000303383 AEBP2Q6ZN18 517 aaPredicted RBP18.02■□□□□ 0.48
SHCBP1-201ENST00000303383 MRC1P22897 1456 aa18.02■□□□□ 0.47
SHCBP1-201ENST00000303383 DDRGK1Q96HY6 314 aa18.02■□□□□ 0.47
SHCBP1-201ENST00000303383 XAGE3Q8WTP9 111 aa18.01■□□□□ 0.47
SHCBP1-201ENST00000303383 ADCY9O60503 1353 aa18.01■□□□□ 0.47
SHCBP1-201ENST00000303383 ATP8B2P98198 1209 aa18.01■□□□□ 0.47
SHCBP1-201ENST00000303383 COPS6Q7L5N1 327 aa18.01■□□□□ 0.47
SHCBP1-201ENST00000303383 ALDH1L1O75891 902 aa18■□□□□ 0.47
SHCBP1-201ENST00000303383 PIP4K2AP48426 406 aaPredicted RBP18■□□□□ 0.47
SHCBP1-201ENST00000303383 SYTL4Q96C24 671 aaPredicted RBP18■□□□□ 0.47
SHCBP1-201ENST00000303383 EXOC6BQ9Y2D4 811 aa17.99■□□□□ 0.47
SHCBP1-201ENST00000303383 COL22A1Q8NFW1 1626 aaPredicted RBP17.98■□□□□ 0.47
SHCBP1-201ENST00000303383 SMARCA5O60264 1052 aaPredicted RBP17.98■□□□□ 0.47
SHCBP1-201ENST00000303383 PDIA6Q15084 440 aa17.98■□□□□ 0.47
SHCBP1-201ENST00000303383 LINS1Q8NG48 757 aa17.98■□□□□ 0.47
SHCBP1-201ENST00000303383 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
SHCBP1-201ENST00000303383 NBPF7P0C2Y1 421 aaPredicted RBP17.98■□□□□ 0.47
SHCBP1-201ENST00000303383 CWF19L2Q2TBE0 894 aaKnown RBP17.98■□□□□ 0.47
SHCBP1-201ENST00000303383 ANKRD13DQ6ZTN6 518 aa17.97■□□□□ 0.47
SHCBP1-201ENST00000303383 PNMA6EA0A0J9YXQ4 647 aa17.97■□□□□ 0.47
SHCBP1-201ENST00000303383 CDCA7Q9BWT1 371 aaPredicted RBP17.97■□□□□ 0.47
SHCBP1-201ENST00000303383 SRGAP3O43295 1099 aa17.97■□□□□ 0.47
SHCBP1-201ENST00000303383 NOP58Q9Y2X3 529 aaKnown RBP17.97■□□□□ 0.47
SHCBP1-201ENST00000303383 BMP2KLQ5H9B9 411 aa17.96■□□□□ 0.47
SHCBP1-201ENST00000303383 RBM42Q9BTD8 480 aaKnown RBP17.96■□□□□ 0.47
SHCBP1-201ENST00000303383 PPP1R42Q7Z4L9 355 aa17.96■□□□□ 0.47
SHCBP1-201ENST00000303383 MYD88Q99836 296 aa17.96■□□□□ 0.47
SHCBP1-201ENST00000303383 LRRCC1Q9C099 1032 aa17.96■□□□□ 0.47
SHCBP1-201ENST00000303383 COL16A1Q07092 1604 aaPredicted RBP17.96■□□□□ 0.47
SHCBP1-201ENST00000303383 MSH5O43196 834 aa17.96■□□□□ 0.47
SHCBP1-201ENST00000303383 ZNF330Q9Y3S2 320 aaPredicted RBP17.96■□□□□ 0.47
SHCBP1-201ENST00000303383 MFAP1P55081 439 aaKnown RBP17.95■□□□□ 0.46
SHCBP1-201ENST00000303383 OS9Q13438 667 aaPredicted RBP17.95■□□□□ 0.46
SHCBP1-201ENST00000303383 DDB1Q16531 1140 aa17.95■□□□□ 0.46
SHCBP1-201ENST00000303383 SEC24BO95487 1268 aa17.95■□□□□ 0.46
SHCBP1-201ENST00000303383 SURF6O75683 361 aaKnown RBP17.95■□□□□ 0.46
SHCBP1-201ENST00000303383 C16orf71Q8IYS4 520 aaPredicted RBP17.95■□□□□ 0.46
SHCBP1-201ENST00000303383 NGLY1Q96IV0 654 aa17.94■□□□□ 0.46
SHCBP1-201ENST00000303383 ERBB4Q15303 1308 aa17.94■□□□□ 0.46
SHCBP1-201ENST00000303383 C5P01031 1676 aa17.94■□□□□ 0.46
SHCBP1-201ENST00000303383 GRM8O00222 908 aa17.94■□□□□ 0.46
SHCBP1-201ENST00000303383 PLEKHM2Q8IWE5 1019 aa17.93■□□□□ 0.46
SHCBP1-201ENST00000303383 ARXQ96QS3 562 aa17.93■□□□□ 0.46
SHCBP1-201ENST00000303383 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
SHCBP1-201ENST00000303383 METTL22Q9BUU2 404 aaPredicted RBP17.93■□□□□ 0.46
SHCBP1-201ENST00000303383 PIGBQ92521 554 aa17.93■□□□□ 0.46
SHCBP1-201ENST00000303383 C8orf37Q96NL8 207 aa17.93■□□□□ 0.46
SHCBP1-201ENST00000303383 TEX13AQ9BXU3 409 aaPredicted RBP17.92■□□□□ 0.46
SHCBP1-201ENST00000303383 SPATA31A1Q5TZJ5 1347 aa17.92■□□□□ 0.46
SHCBP1-201ENST00000303383 A1BGP04217 495 aa17.92■□□□□ 0.46
SHCBP1-201ENST00000303383 ASAP1Q9ULH1 1129 aa17.92■□□□□ 0.46
SHCBP1-201ENST00000303383 HSP90AB4PQ58FF6 505 aa17.92■□□□□ 0.46
SHCBP1-201ENST00000303383 SSH3Q8TE77 659 aa17.92■□□□□ 0.46
SHCBP1-201ENST00000303383 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
SHCBP1-201ENST00000303383 STARD3NLO95772 234 aa17.91■□□□□ 0.46
SHCBP1-201ENST00000303383 DISP2A7MBM2 1401 aa17.9■□□□□ 0.46
SHCBP1-201ENST00000303383 PLBD2Q8NHP8 589 aa17.9■□□□□ 0.46
SHCBP1-201ENST00000303383 NEURL1BA8MQ27 555 aa17.9■□□□□ 0.46
SHCBP1-201ENST00000303383 RAB11FIP3O75154 756 aa17.9■□□□□ 0.46
SHCBP1-201ENST00000303383 OTUD7AQ8TE49 926 aaPredicted RBP17.9■□□□□ 0.46
SHCBP1-201ENST00000303383 TTC22Q5TAA0 569 aa17.89■□□□□ 0.46
SHCBP1-201ENST00000303383 CASC1Q6TDU7 716 aa17.89■□□□□ 0.46
SHCBP1-201ENST00000303383 JCADQ9P266 1359 aa17.89■□□□□ 0.45
SHCBP1-201ENST00000303383 PLCH1Q4KWH8 1693 aa17.89■□□□□ 0.45
SHCBP1-201ENST00000303383 SHANK3Q9BYB0 1731 aa17.89■□□□□ 0.45
SHCBP1-201ENST00000303383 ATP5J2-PTCD1G3V325 749 aa17.89■□□□□ 0.45
SHCBP1-201ENST00000303383 CDC45O75419 566 aa17.89■□□□□ 0.45
SHCBP1-201ENST00000303383 IGKV5-2P06315 115 aa17.89■□□□□ 0.45
SHCBP1-201ENST00000303383 IBTKQ9P2D0 1353 aaPredicted RBP17.89■□□□□ 0.45
SHCBP1-201ENST00000303383 PRIM1P49642 420 aaKnown RBP17.88■□□□□ 0.45
SHCBP1-201ENST00000303383 GCKRQ14397 625 aa17.88■□□□□ 0.45
SHCBP1-201ENST00000303383 ATG3Q9NT62 314 aa17.88■□□□□ 0.45
SHCBP1-201ENST00000303383 NBPF26B4DH59 902 aa17.88■□□□□ 0.45
SHCBP1-201ENST00000303383 NBPF14Q5TI25 921 aa17.88■□□□□ 0.45
SHCBP1-201ENST00000303383 NBPF10Q6P3W6 841 aaKnown RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms