RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 FFAR3O14843 346 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 GPR42O15529 346 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 GALR3O60755 368 aaPredicted RBP16.74■□□□□ 0.27
PTPN11-207ENST00000639857 ALOX12BO75342 701 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 STATHP02808 62 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 SLC35E2BP0CK96 405 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 C8orf89P0DMQ9 161 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 ICAM2P13598 275 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 ALOX12P18054 663 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 XCR1P46094 333 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 AGTR2P50052 363 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 MLLT10P55197 1068 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 SLCO4C1Q6ZQN7 724 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 Q6ZS92 163 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 RAPH1Q70E73 1250 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 TBC1D1Q86TI0 1168 aaPredicted RBP16.74■□□□□ 0.27
PTPN11-207ENST00000639857 PDSS2Q86YH6 399 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 Q8NA96 180 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 KIF18AQ8NI77 898 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 STAG3L4Q8TBR4 150 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 C8orf44Q96CB5 159 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 THOC3Q96J01 351 aaKnown RBP16.74■□□□□ 0.27
PTPN11-207ENST00000639857 CYTH2Q99418 400 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 MACROD1Q9BQ69 325 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 WDR77Q9BQA1 342 aaPredicted RBP16.74■□□□□ 0.27
PTPN11-207ENST00000639857 SLC6A16Q9GZN6 736 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 VN1R1Q9GZP7 353 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 ZNF700Q9H0M5 742 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 SPNS1Q9H2V7 528 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 ACSS3Q9H6R3 686 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 EPS8L2Q9H6S3 715 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 NT5DC2Q9H857 520 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 NMRAL1Q9HBL8 299 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 ZNF160Q9HCG1 818 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 WWOXQ9NZC7 414 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 NAALAD2Q9Y3Q0 740 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 CNTRLQ7Z7A1 2325 aa16.74■□□□□ 0.27
PTPN11-207ENST00000639857 SGK494L7N484 410 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 MASP2O00187 686 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 H2AFYO75367 372 aaKnown RBP16.73■□□□□ 0.27
PTPN11-207ENST00000639857 S100BP04271 92 aaPredicted RBP16.73■□□□□ 0.27
PTPN11-207ENST00000639857 SERPINA7P05543 415 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 SERPINA6P08185 405 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 LTA4HP09960 611 aaKnown RBP16.73■□□□□ 0.27
PTPN11-207ENST00000639857 C1GALT1C1LP0DN25 315 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 HPDP32754 393 aaPredicted RBP16.73■□□□□ 0.27
PTPN11-207ENST00000639857 SNRPNP63162 240 aaKnown RBP16.73■□□□□ 0.27
PTPN11-207ENST00000639857 Q0VFX4 171 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 OR4D1Q15615 310 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 IGFBP7Q16270 282 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 CRB2Q5IJ48 1285 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 COLEC12Q5KU26 742 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 ISLR2Q6UXK2 745 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 PARP9Q8IXQ6 854 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 IQCKQ8N0W5 287 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 KRT78Q8N1N4 520 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 ANKRD53Q8N9V6 530 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 GALNT11Q8NCW6 608 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 LMF1Q96S06 567 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 FMO2Q99518 471 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 TMEM79Q9BSE2 394 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 TUBB6Q9BUF5 446 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 DNAJC11Q9NVH1 559 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 NUDT4Q9NZJ9 180 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 HCN3Q9P1Z3 774 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 PTBP2Q9UKA9 531 aaKnown RBP16.73■□□□□ 0.27
PTPN11-207ENST00000639857 RNF112Q9ULX5 631 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 PLAAQ9Y263 795 aa16.73■□□□□ 0.27
PTPN11-207ENST00000639857 SPENQ96T58 3664 aaKnown RBP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 A0A087X1B8 175 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 NCF1BA6NI72 391 aaPredicted RBP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 NCF1CA8MVU1 366 aaPredicted RBP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 KERAO60938 352 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 RDH16O75452 317 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 STK16O75716 305 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 FAM155BO75949 473 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 PRR35P0CG20 571 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 NCF1P14598 390 aaPredicted RBP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 JAK1P23458 1154 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 EEF1A2Q05639 463 aaKnown RBP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 MFAP5Q13361 173 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 EFTUD2Q15029 972 aaKnown RBP eCLIP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 PCOLCEQ15113 449 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 INPP5JQ15735 1006 aaPredicted RBP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 MINDY4Q4G0A6 757 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 TMIGD1Q6UXZ0 262 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 LRRC70Q7Z2Q7 622 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 CMC1Q7Z7K0 106 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 ISCA2Q86U28 154 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 SPATA6LQ8N4H0 392 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 NOA1Q8NC60 698 aaKnown RBP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 UTP15Q8TED0 518 aaKnown RBP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 MOCOSQ96EN8 888 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 WDR34Q96EX3 536 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 MFRPQ9BY79 579 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 UNKQ9C0B0 810 aaKnown RBP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 ILKAPQ9H0C8 392 aaPredicted RBP16.72■□□□□ 0.27
PTPN11-207ENST00000639857 NINJ2Q9NZG7 142 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 CD274Q9NZQ7 290 aa16.72■□□□□ 0.27
PTPN11-207ENST00000639857 DMGDHQ9UI17 866 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms