RNA–Protein interactions for RNA: ENST00000617339.4

SHROOM1-208, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 3,638 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-208ENST00000617339 VPS4BO75351 444 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 PCCBP05166 539 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 CHRNB1P11230 501 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 CYP2A7P20853 494 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 EMX2Q04743 252 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 HKDC1Q2TB90 917 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 AASDHQ4L235 1098 aaPredicted RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 XKR7Q5GH72 579 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 TTC23Q5W5X9 447 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 STEAP3Q658P3 488 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 PARS2Q7L3T8 475 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 EFL1Q7Z2Z2 1120 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 ZNF740Q8NDX6 193 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 OR4K1Q8NGD4 311 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 OR14C36Q8NHC7 312 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 HDAC2Q92769 488 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 OR51B5Q9H339 312 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 DSN1Q9H410 356 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 RC3H2Q9HBD1 1191 aaKnown RBP13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 SGK2Q9HBY8 427 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 HS3ST2Q9Y278 367 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 NCOR1O75376 2440 aa13.97□□□□□ -0.17
SHROOM1-208ENST00000617339 FRMPD3Q5JV73 1810 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 NINQ8N4C6 2090 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 SYNDIG1LA6NDD5 238 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 RECQL5O94762 991 aaPredicted RBP13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 COX7A2P14406 83 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 NAT1P18440 290 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 CD72P21854 359 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 RPS14P62263 151 aaKnown RBP13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 EPS8Q12929 822 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 ZFAND4Q86XD8 727 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 MINDY2Q8NBR6 621 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 ZHX1-C8orf76Q96EF9 292 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 SORBS1Q9BX66 1292 aaKnown RBP13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 TMEM121BQ9BXQ6 578 aaPredicted RBP13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 CASP3P42574 277 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 NFE2L1Q14494 772 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 PCBP2Q15366 365 aaKnown RBP eCLIP13.96□□□□□ -0.172e-9■■■□□ 15.4
SHROOM1-208ENST00000617339 CXorf40AQ8TE69 158 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 MAL2Q969L2 176 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 RIBC2Q9H4K1 309 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 PCDHB14Q9Y5E9 798 aa13.96□□□□□ -0.17
SHROOM1-208ENST00000617339 ARHGEF33A8MVX0 844 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 H3BM21 787 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 RFXANKO14593 260 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 SSX4O60224 188 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 NFATC1O95644 943 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 SGCGQ13326 291 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 CAMK1Q14012 370 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 CCDC58Q4VC31 144 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 FAM98BQ52LJ0 330 aaKnown RBP13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 TMEM31Q5JXX7 168 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 LYSMD2Q8IV50 215 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 FAR1Q8WVX9 515 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 STON2Q8WXE9 905 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 JPH3Q8WXH2 748 aaPredicted RBP13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 OR8D1Q8WZ84 308 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 NUSAP1Q9BXS6 441 aaKnown RBP13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 GIMAP4Q9NUV9 329 aa13.96□□□□□ -0.18
SHROOM1-208ENST00000617339 KNTC1P50748 2209 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 MAGEB17A8MXT2 336 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 ANGPTL1O95841 491 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 OPN1SWP03999 348 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 CYP17A1P05093 508 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 C7P10643 843 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 ACSM2AQ08AH3 577 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 NPTX1Q15818 432 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 SMN1Q16637 294 aaKnown RBP13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 SNAP47Q5SQN1 464 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 ACSM2BQ68CK6 577 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 AGTRAPQ6RW13 159 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 HMGN2P46Q86SG4 172 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 OR5AK3PQ8NH89 298 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 FGF13Q92913 245 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 MBOAT4Q96T53 435 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 MACROD1Q9BQ69 325 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 SLC6A17Q9H1V8 727 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 RASSF1Q9NS23 344 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 DNAJC11Q9NVH1 559 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 DKK3Q9UBP4 350 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 RAPGEFL1Q9UHV5 662 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 ASF1AQ9Y294 204 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 AOAHP28039 575 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 DLEU7Q6UYE1 221 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 MACC1Q6ZN28 852 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 CPXM2Q8N436 756 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 C1orf52Q8N6N3 182 aaKnown RBP13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 SAMD11Q96NU1 681 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 CARS2Q9HA77 564 aaKnown RBP13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 LOC100506127A0A0U1RQW1 187 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 TNFRSF1BP20333 461 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 CXCR2P25025 360 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 ZFP36L2P47974 494 aaKnown RBP13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 MC1RQ01726 317 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 CYP4F3Q08477 520 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 DOC2AQ14183 400 aa13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 CCBE1Q6UXH8 406 aaPredicted RBP13.95□□□□□ -0.18
SHROOM1-208ENST00000617339 THOC6Q86W42 341 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms