RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 ILKAPQ9H0C8 392 aaPredicted RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 CDC42EP4Q9H3Q1 356 aaKnown RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 ACSS3Q9H6R3 686 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 ALG9Q9H6U8 611 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 CLK4Q9HAZ1 481 aaKnown RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 MLXIPLQ9NP71 852 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 NINJ2Q9NZG7 142 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 MAP10Q9P2G4 905 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 SOCS6O14544 535 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 FOXS1O43638 330 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 LCMT2O60294 686 aaKnown RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 FAM155BO75949 473 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 KLHL18O94889 574 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 STATHP02808 62 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 MYBL2P10244 700 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 XCR1P46094 333 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 SCTRP47872 440 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 HSPA7P48741 367 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 ATG9BQ674R7 924 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 FAAH2Q6GMR7 532 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 KIRREL2Q6UWL6 708 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 TMIGD1Q6UXZ0 262 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 CMC1Q7Z7K0 106 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 PARP9Q8IXQ6 854 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 SPATA6LQ8N4H0 392 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 AMER3Q8N944 861 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 KCT2Q8NC54 265 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 PDPRQ8NCN5 879 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 OR11G2Q8NGC1 345 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 NT5CQ8TCD5 201 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 THOC3Q96J01 351 aaKnown RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 UBXN10Q96LJ8 280 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 OR1F2PQ96R84 312 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 EFCAB11Q9BUY7 163 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 SLC29A3Q9BZD2 475 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 EPN3Q9H201 632 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 EHD1Q9H4M9 534 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 CLMPQ9H6B4 373 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 COPS7BQ9H9Q2 264 aaPredicted RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 HCN3Q9P1Z3 774 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 OPTCQ9UBM4 332 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 DMGDHQ9UI17 866 aaKnown RBP11.69□□□□□ -0.54
CBWD3-208ENST00000612050 TEKT2Q9UIF3 430 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 SH2B3Q9UQQ2 575 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 NAALAD2Q9Y3Q0 740 aa11.69□□□□□ -0.54
CBWD3-208ENST00000612050 POC1B-GALNT4F8VUJ3 575 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 SGK494L7N484 410 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 KERAO60938 352 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 ALOX12BO75342 701 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 VPS4BO75351 444 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 WFS1O76024 890 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 BMP10O95393 424 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 MED26O95402 600 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 SERPINA6P08185 405 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 SLC35E2BP0CK96 405 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 GFAPP14136 432 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 GGT5P36269 586 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 SLC6A12P48065 614 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 PHEXP78562 749 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 MAT1AQ00266 395 aaKnown RBP11.68□□□□□ -0.54
CBWD3-208ENST00000612050 IRF8Q02556 426 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 ACTN3Q08043 901 aaPredicted RBP11.68□□□□□ -0.54
CBWD3-208ENST00000612050 RCN2Q14257 317 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 EFTUD2Q15029 972 aaKnown RBP eCLIP11.68□□□□□ -0.54
CBWD3-208ENST00000612050 ACAP2Q15057 778 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 XKR6Q5GH73 641 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 TRIM40Q6P9F5 258 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 KLHDC8AQ8IYD2 350 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 DTWD1Q8N5C7 304 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 ARMC2Q8NEN0 867 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 RHEBL1Q8TAI7 183 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 PNPLA2Q96AD5 504 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 PTCD3Q96EY7 689 aaKnown RBP11.68□□□□□ -0.54
CBWD3-208ENST00000612050 MACROD1Q9BQ69 325 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 CENPKQ9BS16 269 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 TUBB6Q9BUF5 446 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 VPS11Q9H270 941 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 OCEL1Q9H607 264 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 ZNF160Q9HCG1 818 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 SNX15Q9NRS6 342 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 IKZF3Q9UKT9 509 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 TMCO1Q9UM00 188 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 VPS4AQ9UN37 437 aa11.68□□□□□ -0.54
CBWD3-208ENST00000612050 A0A096LPK6 155 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 EXOC1LA0A1B0GW35 172 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 DYTNA2CJ06 578 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 FFAR3O14843 346 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 GPR42O15529 346 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 RDH16O75452 317 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 WISP3O95389 354 aaPredicted RBP11.67□□□□□ -0.54
CBWD3-208ENST00000612050 C2P06681 752 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 ZNF888P0CJ79 500 aaPredicted RBP11.67□□□□□ -0.54
CBWD3-208ENST00000612050 EPB42P16452 691 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 SERPINB1P30740 379 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 GDF5P43026 501 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 PIK3CGP48736 1102 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 FOXL2P58012 376 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 EEF1A2Q05639 463 aaKnown RBP11.67□□□□□ -0.54
CBWD3-208ENST00000612050 BMPR2Q13873 1038 aa11.67□□□□□ -0.54
CBWD3-208ENST00000612050 SLBPQ14493 270 aaKnown RBP eCLIP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms