RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 ITGAMP11215 1152 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 HNF4AP41235 474 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 SCTRP47872 440 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 EFTUD2Q15029 972 aaKnown RBP eCLIP17.02■□□□□ 0.324e-14■■□□□ 12.8
SRSF1-208ENST00000584773 EIF2S3LQ2VIR3 472 aaKnown RBP17.02■□□□□ 0.32
SRSF1-208ENST00000584773 ISLR2Q6UXK2 745 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 C3orf62Q6ZUJ4 267 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 FRA10AC1Q70Z53 315 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 ANKRD53Q8N9V6 530 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 DNAJB14Q8TBM8 379 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 PPP4R1Q8TF05 950 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 PEX11GQ96HA9 241 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 RBBP8Q99708 897 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 SARGQ9BW04 601 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 ZNF700Q9H0M5 742 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 EPS8L2Q9H6S3 715 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 UTP11Q9Y3A2 253 aaKnown RBP17.02■□□□□ 0.32
SRSF1-208ENST00000584773 DYRK1BQ9Y463 629 aa17.02■□□□□ 0.32
SRSF1-208ENST00000584773 HIVEP3Q5T1R4 2406 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 BLACEA4D250 179 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 C4orf51C9J302 202 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 SEMA7AO75326 666 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 WDR47O94967 919 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 ZNF888P0CJ79 500 aaPredicted RBP17.01■□□□□ 0.31
SRSF1-208ENST00000584773 SOX11P35716 441 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 SLC12A2P55011 1212 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 POU4F1Q01851 419 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 MFAP5Q13361 173 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 USP10Q14694 798 aaKnown RBP17.01■□□□□ 0.31
SRSF1-208ENST00000584773 DEFB134Q4QY38 66 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 UBAP2Q5T6F2 1119 aaKnown RBP17.01■□□□□ 0.31
SRSF1-208ENST00000584773 NXPE4Q6UWF7 544 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 CTAGE3PQ8IX95 158 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 AFAP1L2Q8N4X5 818 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 ESAMQ96AP7 390 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 RHBDF1Q96CC6 855 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 CYTH2Q99418 400 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 GPR22Q99680 433 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 TMEM79Q9BSE2 394 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 AICDAQ9GZX7 198 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 KLHL31Q9H511 634 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 POPDC3Q9HBV1 291 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 RIC8BQ9NVN3 520 aa17.01■□□□□ 0.31
SRSF1-208ENST00000584773 SERPINA7P05543 415 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 CCDC166P0CW27 439 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 GP5P40197 560 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 ST13P50502 369 aaKnown RBP17■□□□□ 0.31
SRSF1-208ENST00000584773 RAB8AP61006 207 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 CDKL1Q00532 357 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 HYAL2Q12891 473 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 RBBP5Q15291 538 aaKnown RBP17■□□□□ 0.31
SRSF1-208ENST00000584773 OR4D1Q15615 310 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 KBTBD12Q3ZCT8 623 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 ZNF572Q7Z3I7 529 aaPredicted RBP17■□□□□ 0.31
SRSF1-208ENST00000584773 ANKRD37Q7Z713 158 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 ADAMTSL2Q86TH1 951 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 PPM1NQ8N819 430 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 NT5CQ8TCD5 201 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 ANKRD7Q92527 254 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 CDKL2Q92772 493 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 TSLPQ969D9 159 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 IMMP1LQ96LU5 166 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 C16orf45Q96MC5 204 aaPredicted RBP17■□□□□ 0.31
SRSF1-208ENST00000584773 CPNE1Q99829 537 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 DERL2Q9GZP9 239 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 PELI2Q9HAT8 420 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 LRRC4CQ9HCJ2 640 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 LANCL2Q9NS86 450 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 ZFP69BQ9UJL9 534 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 COPG1Q9Y678 874 aaKnown RBP17■□□□□ 0.31
SRSF1-208ENST00000584773 SLC22A7Q9Y694 548 aa17■□□□□ 0.31
SRSF1-208ENST00000584773 NBPF19A0A087WUL8 3843 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 TAPBPO15533 448 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 GALR3O60755 368 aaPredicted RBP16.99■□□□□ 0.31
SRSF1-208ENST00000584773 CD1DP15813 335 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 MAGEA4P43358 317 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 SLC6A12P48065 614 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 ZNF169Q14929 603 aaPredicted RBP16.99■□□□□ 0.31
SRSF1-208ENST00000584773 TGFBIQ15582 683 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 FHL5Q5TD97 284 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 CPEB2Q7Z5Q1 589 aaKnown RBP16.99■□□□□ 0.31
SRSF1-208ENST00000584773 CMC1Q7Z7K0 106 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 PRR7Q8TB68 274 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 UTP15Q8TED0 518 aaKnown RBP16.99■□□□□ 0.31
SRSF1-208ENST00000584773 FBF1Q8TES7 1133 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 METTL21AQ8WXB1 218 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 EXT2Q93063 718 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 LRRC1Q9BTT6 524 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 SLC29A3Q9BZD2 475 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 RAB17Q9H0T7 212 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 TXNDC16Q9P2K2 825 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 SVILO95425 2214 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 ICE1Q9Y2F5 2266 aa16.99■□□□□ 0.31
SRSF1-208ENST00000584773 USP9YO00507 2555 aaPredicted RBP16.99■□□□□ 0.31
SRSF1-208ENST00000584773 CHST10O43529 356 aa16.98■□□□□ 0.31
SRSF1-208ENST00000584773 PRAMEF4O60810 478 aa16.98■□□□□ 0.31
SRSF1-208ENST00000584773 AGFG2O95081 481 aa16.98■□□□□ 0.31
SRSF1-208ENST00000584773 UQCRHP07919 91 aa16.98■□□□□ 0.31
SRSF1-208ENST00000584773 ALOX12P18054 663 aa16.98■□□□□ 0.31
SRSF1-208ENST00000584773 ARG2P78540 354 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms