RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 KBTBD2Q8IY47 623 aa28.64■■■□□ 2.18
SSSCA1-207ENST00000533115 ANKRD53Q8N9V6 530 aa28.64■■■□□ 2.18
SSSCA1-207ENST00000533115 VN1R1Q9GZP7 353 aa28.64■■■□□ 2.18
SSSCA1-207ENST00000533115 RELNP78509 3460 aa28.64■■■□□ 2.17
SSSCA1-207ENST00000533115 ASH1LQ9NR48 2969 aaKnown RBP28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 PRRC2CQ9Y520 2896 aaKnown RBP28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 TAPBPO15533 448 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 CYC1P08574 325 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 VARSP26640 1264 aaKnown RBP28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 GGT5P36269 586 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 RBBP5Q15291 538 aaKnown RBP28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 INPP5JQ15735 1006 aaPredicted RBP28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 MINDY4Q4G0A6 757 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 MFSD4BQ5TF39 518 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 IGFL2Q6UWQ7 119 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 RAPH1Q70E73 1250 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 CMC1Q7Z7K0 106 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 NOA1Q8NC60 698 aaKnown RBP28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 TRPV3Q8NET8 790 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 METTL21AQ8WXB1 218 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 KIAA1191Q96A73 305 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 TMEM79Q9BSE2 394 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 ZNF700Q9H0M5 742 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 RIC8BQ9NVN3 520 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 WWOXQ9NZC7 414 aa28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 DMGDHQ9UI17 866 aaKnown RBP28.63■■■□□ 2.17
SSSCA1-207ENST00000533115 FLNBO75369 2602 aaKnown RBP28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 CTAGE15A4D2H0 777 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 SLC35E2BP0CK96 405 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 C8orf89P0DMQ9 161 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 C1GALT1C1LP0DN25 315 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 ALOX12P18054 663 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 CRABP2P29373 138 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 CDC16Q13042 620 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 PCOLCEQ15113 449 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 SULT1C3Q6IMI6 304 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 SLCO4C1Q6ZQN7 724 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 CTAGE6Q86UF2 777 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 CYTH2Q99418 400 aa28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 CNOT10Q9H9A5 744 aaKnown RBP28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 MTRF1LQ9UGC7 380 aaKnown RBP28.62■■■□□ 2.17
SSSCA1-207ENST00000533115 ZNF860A6NHJ4 632 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 KIF2AO00139 706 aaPredicted RBP28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 GALR3O60755 368 aaPredicted RBP28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 H2AFYO75367 372 aaKnown RBP28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 PRR35P0CG20 571 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 CTAGE8P0CG41 777 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 GMPRP36959 345 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 SKP1P63208 163 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 DEFB134Q4QY38 66 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 PRR30Q53SZ7 412 aaPredicted RBP28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 NIPAL1Q6NVV3 410 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 Q6ZS92 163 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 CEP128Q6ZU80 1094 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 ABHD13Q7L211 337 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 CTAGE4Q8IX94 777 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 CAPS2Q9BXY5 557 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 ILKAPQ9H0C8 392 aaPredicted RBP28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 GPRC5BQ9NZH0 403 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 CD274Q9NZQ7 290 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 RNF112Q9ULX5 631 aa28.61■■■□□ 2.17
SSSCA1-207ENST00000533115 VPS4BO75351 444 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 SERPINA7P05543 415 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 ZNF888P0CJ79 500 aaPredicted RBP28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 PHBP35232 272 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 DLG1Q12959 904 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 TBC1D1Q86TI0 1168 aaPredicted RBP28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 RELL1Q8IUW5 271 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 IQCKQ8N0W5 287 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 PDPRQ8NCN5 879 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 OR5T3Q8NGG3 340 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 UTP15Q8TED0 518 aaKnown RBP28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 PPP4R1Q8TF05 950 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 PEX11GQ96HA9 241 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 WDR77Q9BQA1 342 aaPredicted RBP28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 SLC6A16Q9GZN6 736 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 EPS8L2Q9H6S3 715 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 NMRAL1Q9HBL8 299 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 DNAJC11Q9NVH1 559 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 NINJ2Q9NZG7 142 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 VPS4AQ9UN37 437 aa28.6■■■□□ 2.17
SSSCA1-207ENST00000533115 URADA6NGE7 173 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 STK16O75716 305 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 IL10P22301 178 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 HSPA7P48741 367 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 HYAL2Q12891 473 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 GLE1Q53GS7 698 aaKnown RBP28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 FBXO48Q5FWF7 155 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 ISLR2Q6UXK2 745 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 GALNT11Q8NCW6 608 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 STAG3L4Q8TBR4 150 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 CREB3L4Q8TEY5 395 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 MRRFQ96E11 262 aaKnown RBP28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 OR1F2PQ96R84 312 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 TUBB6Q9BUF5 446 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 TSPYL1Q9H0U9 437 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 ALG9Q9H6U8 611 aa28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 C19orf25Q9UFG5 118 aaPredicted RBP28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 PTBP2Q9UKA9 531 aaKnown RBP28.59■■■□□ 2.17
SSSCA1-207ENST00000533115 OR2W5A6NFC9 320 aa28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms