RNA–Protein interactions for RNA: ENST00000533089.5

TGFBR3-210, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 6,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-210ENST00000533089 SPATA13Q96N96 652 aa6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 SNRNP25Q9BV90 132 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 ACTR6Q9GZN1 396 aa6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 ENAMQ9NRM1 1142 aa6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 DUS2Q9NX74 493 aaKnown RBP6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 SRRDQ9UH36 339 aa6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 PCDHGB6Q9Y5F9 930 aa6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 ARL5AQ9Y689 179 aa6.77□□□□□ -1.33
TGFBR3-210ENST00000533089 A0A0J9YYE9 177 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 NFATC1O95644 943 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 INHAP05111 366 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 EDN3P14138 238 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 GOT1P17174 413 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 LPOP22079 712 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 SLC1A2P43004 574 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CASP9P55211 416 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 RSU1Q15404 277 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CPSF6Q16630 551 aaKnown RBP eCLIP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 RNF212Q495C1 297 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 SPATC1Q76KD6 591 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 SLC16A9Q7RTY1 509 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 C12orf29Q8N999 325 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 PAPD5Q8NDF8 572 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 OR4D10Q8NGI6 311 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 LINGO1Q96FE5 620 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 KCTD7Q96MP8 289 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CLCC1Q96S66 551 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 TCF25Q9BQ70 676 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 EBF4Q9BQW3 602 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 WRAP53Q9BUR4 548 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 TMEM109Q9BVC6 243 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 AMBNQ9NP70 447 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 FBXL3Q9UKT7 428 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 COPS3Q9UNS2 423 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 TRAF6Q9Y4K3 522 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 KDM3BQ7LBC6 1761 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CNTNAP1P78357 1384 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 DCLK1O15075 740 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ATP6AP2O75787 350 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 UGT2B17O75795 530 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 STBD1O95210 358 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CHRNA1P02708 482 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CYP11A1P05108 521 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CFIP05156 583 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 HOXB8P17481 243 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ATP5F1P24539 256 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 SSR2P43308 183 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 REEP5Q00765 189 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 MVKQ03426 396 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 DAG1Q14118 895 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 GALNTL5Q7Z4T8 443 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 IL31RAQ8NI17 732 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 PHF10Q8WUB8 498 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ARL11Q969Q4 196 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ADIPOR1Q96A54 375 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 LRFN5Q96NI6 719 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 SNX18Q96RF0 628 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 TMEM209Q96SK2 561 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 AARSD1Q9BTE6 412 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 DNTTIP1Q9H147 329 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 DPEP2Q9H4A9 486 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 NXF3Q9H4D5 531 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 MFHAS1Q9Y4C4 1052 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 COL2A1P02458 1487 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 OR6C75A6NL08 312 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 MSI1O43347 362 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 DNAJB6O75190 326 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 TFEBP19484 476 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ICAM3P32942 547 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ASMTP46597 345 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CAPSQ13938 189 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 GRIN2CQ14957 1233 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 FAM83HQ6ZRV2 1179 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CNTD1Q8N815 330 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ZNF565Q8N9K5 539 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 DTD1Q8TEA8 209 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ZDHHC1Q8WTX9 485 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 TM9SF4Q92544 642 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 EMID1Q96A84 441 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 RIPOR3Q96MK2 946 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 TINAGL1Q9GZM7 467 aaPredicted RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 OR51B5Q9H339 312 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 C1orf109Q9NX04 203 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CD84Q9UIB8 345 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 MRPS17Q9Y2R5 130 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 PLLPQ9Y342 182 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 WDR45Q9Y484 360 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 USP54Q70EL1 1684 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 SIGLEC16A6NMB1 481 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 BBIP1A8MTZ0 92 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 OR10H3O60404 316 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 MAFKO60675 156 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 FAM155BO75949 473 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 HGFP14210 728 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 CORO1AP31146 461 aaKnown RBP6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 NDUFA9Q16795 377 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 UGT3A2Q3SY77 523 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 BCL2L15Q5TBC7 163 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 LRRC66Q68CR7 880 aa6.76□□□□□ -1.33
TGFBR3-210ENST00000533089 ZNF600Q6ZNG1 722 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms