RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 AHRP35869 848 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 SLC6A12P48065 614 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 OR4D1Q15615 310 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 TMEM205Q6UW68 189 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 LINC00696Q6ZRV3 163 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 RAPH1Q70E73 1250 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 ANKRD53Q8N9V6 530 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 NT5CQ8TCD5 201 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 WDR77Q9BQA1 342 aaPredicted RBP31.39■■■□□ 2.62
CBX4-203ENST00000494546 EPS8L2Q9H6S3 715 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 CSAG2Q9Y5P2 127 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 SCN3AQ9NY46 2000 aa31.39■■■□□ 2.62
CBX4-203ENST00000494546 CTAGE15A4D2H0 777 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 ZNF888P0CJ79 500 aaPredicted RBP31.38■■■□□ 2.61
CBX4-203ENST00000494546 ALOX12P18054 663 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 GMPRP36959 345 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 NAB1Q13506 487 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 PCOLCEQ15113 449 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 DEFB134Q4QY38 66 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 Q6ZS92 163 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 CMC1Q7Z7K0 106 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 CTAGE6Q86UF2 777 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 AFAP1L2Q8N4X5 818 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 OR5T3Q8NGG3 340 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 PEX11GQ96HA9 241 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 RBCK1Q9BYM8 510 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 ZNF700Q9H0M5 742 aa31.38■■■□□ 2.61
CBX4-203ENST00000494546 DOCK10Q96BY6 2186 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 OR2W5A6NFC9 320 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 B3GALT4O96024 378 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 PRR35P0CG20 571 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 GNAZP19086 355 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 HNF4AP41235 474 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 UQCRFS1P47985 274 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 FBXO48Q5FWF7 155 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 IGFL2Q6UWQ7 119 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 ISLR2Q6UXK2 745 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 ABHD13Q7L211 337 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 KLHDC8AQ8IYD2 350 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 TCAIMQ8N3R3 496 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 GALNT11Q8NCW6 608 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 EXT2Q93063 718 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 MRRFQ96E11 262 aaKnown RBP31.37■■■□□ 2.61
CBX4-203ENST00000494546 UBXN10Q96LJ8 280 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 CYTH2Q99418 400 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 CD274Q9NZQ7 290 aa31.37■■■□□ 2.61
CBX4-203ENST00000494546 TAPBPO15533 448 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 GALR3O60755 368 aaPredicted RBP31.36■■■□□ 2.61
CBX4-203ENST00000494546 H2AFYO75367 372 aaKnown RBP31.36■■■□□ 2.61
CBX4-203ENST00000494546 SERPINA7P05543 415 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 CELA2AP08217 269 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 GNLYP22749 145 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 SKP1P63208 163 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 CDC16Q13042 620 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 LANCL3Q6ZV70 420 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 CUZD1Q86UP6 607 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 MMGT1Q8N4V1 131 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 CISD2Q8N5K1 135 aaKnown RBP31.36■■■□□ 2.61
CBX4-203ENST00000494546 TRPV3Q8NET8 790 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 BRIX1Q8TDN6 353 aaKnown RBP31.36■■■□□ 2.61
CBX4-203ENST00000494546 PPP4R1Q8TF05 950 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 CNDP1Q96KN2 507 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 TMEM79Q9BSE2 394 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 CNOT10Q9H9A5 744 aaKnown RBP31.36■■■□□ 2.61
CBX4-203ENST00000494546 PTGFRNQ9P2B2 879 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 RNF112Q9ULX5 631 aa31.36■■■□□ 2.61
CBX4-203ENST00000494546 IGHV3-20A0A0C4DH32 117 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 UQCRHP07919 91 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 C1GALT1C1LP0DN25 315 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 GLRBP48167 497 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 OLR1P78380 273 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 MFAP5Q13361 173 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 SULT1C3Q6IMI6 304 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 SLCO4C1Q6ZQN7 724 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 DNAJB14Q8TBM8 379 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 KIAA1191Q96A73 305 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 ESAMQ96AP7 390 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 SNRNP40Q96DI7 357 aaKnown RBP31.35■■■□□ 2.61
CBX4-203ENST00000494546 C19orf60Q96EN9 201 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 DNAJC11Q9NVH1 559 aa31.35■■■□□ 2.61
CBX4-203ENST00000494546 C19orf25Q9UFG5 118 aaPredicted RBP31.35■■■□□ 2.61
CBX4-203ENST00000494546 CDC123O75794 336 aaPredicted RBP31.34■■■□□ 2.61
CBX4-203ENST00000494546 CYC1P08574 325 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 SLC35E2BP0CK96 405 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 HSPA7P48741 367 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 SLBPQ14493 270 aaKnown RBP eCLIP31.34■■■□□ 2.61
CBX4-203ENST00000494546 CRB2Q5IJ48 1285 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 CDKL4Q5MAI5 379 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 SIRT6Q8N6T7 355 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 AMER2Q8N7J2 671 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 NOA1Q8NC60 698 aaKnown RBP31.34■■■□□ 2.61
CBX4-203ENST00000494546 MNS1Q8NEH6 495 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 UTP15Q8TED0 518 aaKnown RBP31.34■■■□□ 2.61
CBX4-203ENST00000494546 TUBB6Q9BUF5 446 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 CAPS2Q9BXY5 557 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 SLC6A16Q9GZN6 736 aa31.34■■■□□ 2.61
CBX4-203ENST00000494546 MTRF1LQ9UGC7 380 aaKnown RBP31.34■■■□□ 2.61
CBX4-203ENST00000494546 URADA6NGE7 173 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 DNAJB6O75190 326 aa31.33■■■□□ 2.61
CBX4-203ENST00000494546 WFS1O76024 890 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms