RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 MROH6A6NGR9 719 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 POLR2CP19387 275 aaPredicted RBP13.31□□□□□ -0.28
BRAT1-203ENST00000467558 MLLT3P42568 568 aaPredicted RBP13.31□□□□□ -0.28
BRAT1-203ENST00000467558 HTR6P50406 440 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 ZNF234Q14588 700 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 TMEM44Q2T9K0 475 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 FBXO43Q4G163 708 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 GOLM1Q8NBJ4 401 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 IPCEF1Q8WWN9 437 aaPredicted RBP13.31□□□□□ -0.28
BRAT1-203ENST00000467558 PKP4Q99569 1192 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 C11orf16Q9NQ32 467 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 CCM2LQ9NUG4 571 aaPredicted RBP13.31□□□□□ -0.28
BRAT1-203ENST00000467558 TCRBV21S2A2A0A5A6 115 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 MAN2B1O00754 1011 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 ZNF846Q147U1 533 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 TAB1Q15750 504 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 RBM48Q5RL73 367 aaKnown RBP13.31□□□□□ -0.28
BRAT1-203ENST00000467558 TRAF7Q6Q0C0 670 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 DPPA4Q7L190 304 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 FCGR1BQ92637 280 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 C5orf34Q96MH7 638 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 SLC22A12Q96S37 553 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 RDH14Q9HBH5 336 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 LYARQ9NX58 379 aaKnown RBP13.31□□□□□ -0.28
BRAT1-203ENST00000467558 MS4A12Q9NXJ0 267 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 TVP23BQ9NYZ1 205 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 CLCA3PQ9Y6N3 262 aa13.31□□□□□ -0.28
BRAT1-203ENST00000467558 ADAMTSL1Q8N6G6 1762 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 TMCC2O75069 709 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 ASGR2P07307 311 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 CD9P21926 228 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 RBBP4Q09028 425 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 FADDQ13158 208 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 NFE2L1Q14494 772 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 CYBRD1Q53TN4 286 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 POMZP3Q6PJE2 187 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 GAREM2Q75VX8 874 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 KCT2Q8NC54 265 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 OR4C6Q8NH72 309 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 HUS1BQ8NHY5 278 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 OR5P2Q8WZ92 322 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 WDR12Q9GZL7 423 aaKnown RBP13.3□□□□□ -0.28
BRAT1-203ENST00000467558 ZBP1Q9H171 429 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 TM9SF3Q9HD45 589 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 LY75O60449 1722 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 HIDE1A8MVS5 230 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 XKRYO14609 159 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 ARSAP15289 507 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 IL12BP29460 328 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 DHPSP49366 369 aaPredicted RBP13.3□□□□□ -0.28
BRAT1-203ENST00000467558 LASP1Q14847 261 aaKnown RBP13.3□□□□□ -0.28
BRAT1-203ENST00000467558 VMACQ2NL98 169 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 SMU1Q2TAY7 513 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 SFT2D3Q587I9 215 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 SATL1Q86VE3 508 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 RNF130Q86XS8 419 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 PSMA8Q8TAA3 256 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 TIMMDC1Q9NPL8 285 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 ABCB10Q9NRK6 738 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 ZNF624Q9P2J8 865 aaPredicted RBP13.3□□□□□ -0.28
BRAT1-203ENST00000467558 SCML1Q9UN30 329 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 HS3ST2Q9Y278 367 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 MUSKO15146 869 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 COQ9O75208 318 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 ZNF24P17028 368 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 IGFBP6P24592 240 aaPredicted RBP13.3□□□□□ -0.28
BRAT1-203ENST00000467558 GPR68Q15743 365 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 LRRC26Q2I0M4 334 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 LETMD1Q6P1Q0 360 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 LIPIQ6XZB0 460 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 ARHGAP22Q7Z5H3 698 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 OAFQ86UD1 273 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 ACVR1CQ8NER5 493 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 LMX1AQ8TE12 382 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 KCNK13Q9HB14 408 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 TMEM45AQ9NWC5 275 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 STOX2Q9P2F5 926 aaPredicted RBP13.3□□□□□ -0.28
BRAT1-203ENST00000467558 DNMT3BQ9UBC3 853 aaKnown RBP13.3□□□□□ -0.28
BRAT1-203ENST00000467558 PCDHGA4Q9Y5G9 962 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 ZNF831Q5JPB2 1677 aa13.3□□□□□ -0.28
BRAT1-203ENST00000467558 C2orf74A8MZ97 194 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 TYRP1P17643 537 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 GSTM3P21266 225 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 RAB28P51157 221 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 INHBCP55103 352 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 ERVFC1P60507 584 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 IQCCQ4KMZ1 466 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 KHDRBS2Q5VWX1 349 aaKnown RBP13.29□□□□□ -0.28
BRAT1-203ENST00000467558 DENND5AQ6IQ26 1287 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 CGB2Q6NT52 195 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 HSD11B1LQ7Z5J1 315 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 JAZF1Q86VZ6 243 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 PGBD5Q8N414 524 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 PDPRQ8NCN5 879 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 RAB2BQ8WUD1 216 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 BORCS5Q969J3 196 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 ATOH8Q96SQ7 321 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 RC3H2Q9HBD1 1191 aaKnown RBP13.29□□□□□ -0.28
BRAT1-203ENST00000467558 CASKO14936 926 aa13.29□□□□□ -0.28
BRAT1-203ENST00000467558 UGDHO60701 494 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms