RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 GDF5P43026 501 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 CLDN8P56748 225 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 UFM1P61960 85 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 SIM2Q14190 667 aaPredicted RBP11.56□□□□□ -0.56
PTPRF-205ENST00000414879 SYT16Q17RD7 645 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 SLC44A4Q53GD3 710 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 MFSD6LQ8IWD5 586 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 TEX26Q8N6G2 289 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 EFHD2Q96C19 240 aaPredicted RBP11.56□□□□□ -0.56
PTPRF-205ENST00000414879 TREX1Q9NSU2 369 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 APOBEC3BQ9UH17 382 aaKnown RBP11.56□□□□□ -0.56
PTPRF-205ENST00000414879 KIR2DS5A0A0G2JLQ3 304 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 A0A0G2JNG1 304 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 KIR2DS3K7RE56 304 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 HAT1O14929 419 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 CREG1O75629 220 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 CEBPBP17676 345 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 PGDP52209 483 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 ADAM17P78536 824 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 KIR2DS5Q14953 304 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 CEACAM20Q6UY09 585 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 KRT74Q7RTS7 529 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 MINDY1Q8N5J2 469 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 METTL25Q8N6Q8 603 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 PLA2G15Q8NCC3 412 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 FGF13Q92913 245 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 TIMM29Q9BSF4 260 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 MARCH5Q9NX47 278 aa11.56□□□□□ -0.56
PTPRF-205ENST00000414879 MARCH4Q9P2E8 410 aaPredicted RBP11.56□□□□□ -0.56
PTPRF-205ENST00000414879 PTBP2Q9UKA9 531 aaKnown RBP11.56□□□□□ -0.56
PTPRF-205ENST00000414879 hCG_2014768A0A024R1R8 64 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 EEDO75530 441 aaKnown RBP11.55□□□□□ -0.56
PTPRF-205ENST00000414879 CD63P08962 238 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 MYCLP1P12525 358 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ALOX12P18054 663 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 RPL34P49207 117 aaKnown RBP11.55□□□□□ -0.56
PTPRF-205ENST00000414879 FAM189A2Q15884 450 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 GRHL2Q6ISB3 625 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 LAPTM4BQ86VI4 370 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 SPATA6Q9NWH7 488 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-205ENST00000414879 CXorf51AA0A1B0GTR3 108 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 TRBC2A0A5B9 178 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 TRIM43BA6NCK2 446 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 SAGE2PA6NJ88 616 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 SNNO75324 88 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-205ENST00000414879 F11P03951 625 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 JUNDP17535 347 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 CXCR1P25024 350 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 S100GP29377 79 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ARSDP51689 593 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF140P52738 457 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-205ENST00000414879 TBPL1P62380 186 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 GBX1Q14549 363 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 PTPRCAPQ14761 206 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 SPANXN4Q5MJ08 99 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 KANK2Q63ZY3 851 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF440Q8IYI8 595 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 OR6C4Q8NGE1 309 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 SNX33Q8WV41 574 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 NCSTNQ92542 709 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 KIAA1143Q96AT1 154 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-205ENST00000414879 DHRS4Q9BTZ2 278 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 GPR174Q9BXC1 333 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 OR51B5Q9H339 312 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 EHD3Q9NZN3 535 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 HCFC2Q9Y5Z7 792 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 BLACEA4D250 179 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 TMX2-CTNND1H3BSU7 103 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 MID1O15344 667 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 EMC8O43402 210 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 NUAK1O60285 661 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ASGR2P07307 311 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 TACSTD2P09758 323 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 FOSL2P15408 326 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 MSX2P35548 267 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-205ENST00000414879 CTSOP43234 321 aaPredicted RBP11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ARSFP54793 590 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 CREB5Q02930 508 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 MOGSQ13724 837 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF234Q14588 700 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 IQCCQ4KMZ1 466 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 RPL13AP3Q6NVV1 102 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 LCTLQ6UWM7 567 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 NAPRTQ6XQN6 538 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ERMP1Q7Z2K6 904 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 DTD2Q96FN9 168 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 IL26Q9NPH9 171 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 MGAT4BQ9UQ53 548 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 IGLV3-10A0A075B6K4 115 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 K7ERQ8 282 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 C8BP07358 591 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ZNF823P16415 610 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 SMSP52788 366 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 CTC1Q2NKJ3 1217 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 C6orf89Q6UWU4 347 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 BNIPLQ7Z465 357 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ISCA2Q86U28 154 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 KIAA1958Q8N8K9 716 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 ACVR1CQ8NER5 493 aa11.55□□□□□ -0.56
PTPRF-205ENST00000414879 DAZLQ92904 295 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms