RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 ACAP2Q15057 778 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 RBBP5Q15291 538 aaKnown RBP8.79□□□□□ -1
HMGN1-202ENST00000380747 NDUFA9Q16795 377 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 C4orf17Q53FE4 359 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 CDKL4Q5MAI5 379 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 FAM69BQ5VUD6 431 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 BORAQ6PGQ7 559 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 NXPE4Q6UWF7 544 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 VN1R4Q7Z5H5 301 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 ASPGQ86U10 573 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 KLHDC8AQ8IYD2 350 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 DTWD1Q8N5C7 304 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 MFSD9Q8NBP5 474 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 CAMKVQ8NCB2 501 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 PDPRQ8NCN5 879 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 ZNF740Q8NDX6 193 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 OR4K1Q8NGD4 311 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 RNF217Q8TC41 542 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.79□□□□□ -1
HMGN1-202ENST00000380747 SCYL1Q96KG9 808 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 CATSPER2Q96P56 530 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 ATOH8Q96SQ7 321 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 AIF1LQ9BQI0 150 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 CCDC77Q9BR77 488 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 DHRS4Q9BTZ2 278 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 YIPF2Q9BWQ6 316 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 EPB41L4BQ9H329 900 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 PELI2Q9HAT8 420 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 ZNF304Q9HCX3 659 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 ENAMQ9NRM1 1142 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 SLC22A11Q9NSA0 550 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 DNAJC11Q9NVH1 559 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 GEMIN8Q9NWZ8 242 aaKnown RBP8.79□□□□□ -1
HMGN1-202ENST00000380747 TCFL5Q9UL49 500 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 CDC14AQ9UNH5 594 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 PTRH2Q9Y3E5 179 aaKnown RBP8.79□□□□□ -1
HMGN1-202ENST00000380747 KCNE1BA0A087WTH5 132 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 A0A0A6YYC8 382 aaPredicted RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 IQANK1A0A1B0GTG1 560 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 TRBC2A0A5B9 178 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 SYCE1LA8MT33 242 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 I3L1I5 382 aaPredicted RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 CLGNO14967 610 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 IPO13O94829 963 aaKnown RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 CD63P08962 238 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 FURINP09958 794 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 C1GALT1C1LP0DN25 315 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 GFAPP14136 432 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 GNAZP19086 355 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 ITGAXP20702 1163 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 GCAP28676 217 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 OTX2P32243 289 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 DEKP35659 375 aaKnown RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 GGT5P36269 586 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 MAGEA12P43365 314 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 CCR10P46092 362 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 AGTR2P50052 363 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 FOXL2P58012 376 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 VSNL1P62760 191 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 REEP5Q00765 189 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 TLE1Q04724 770 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 POU4F2Q12837 409 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 IL10RAQ13651 578 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 UBAP2LQ14157 1087 aaKnown RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 PDK4Q16654 411 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 UGT8Q16880 541 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 COX20Q5RI15 118 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 GARNL3Q5VVW2 1013 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 PRMT9Q6P2P2 845 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 SHISA6Q6ZSJ9 500 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 COX15Q7KZN9 410 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 OVCH1Q7RTY7 1134 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 LRRC70Q7Z2Q7 622 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 PLD6Q8N2A8 252 aaKnown RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 RHEBL1Q8TAI7 183 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 ZCCHC10Q8TBK6 192 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 SLC13A3Q8WWT9 602 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 ISL2Q96A47 359 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 FKBP10Q96AY3 582 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 MTBPQ96DY7 904 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 MMABQ96EY8 250 aaPredicted RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 CAPS2Q9BXY5 557 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 CD244Q9BZW8 370 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 SLC25A18Q9H1K4 315 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 ADNPQ9H2P0 1102 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 SPNS1Q9H2V7 528 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 GPRC5BQ9NZH0 403 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 CPSF2Q9P2I0 782 aaKnown RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 PSMC3IPQ9P2W1 217 aaPredicted RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 TBK1Q9UHD2 729 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 PTBP2Q9UKA9 531 aaKnown RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 POLHQ9Y253 713 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 MAN2B2Q9Y2E5 1009 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 MRPS2Q9Y399 296 aaKnown RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 TEP1Q99973 2627 aaKnown RBP8.78□□□□□ -1
HMGN1-202ENST00000380747 CREBBPQ92793 2442 aa8.78□□□□□ -1
HMGN1-202ENST00000380747 LRBAP50851 2863 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 SMIM23A6NLE4 172 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 TTLL8A6PVC2 850 aa8.77□□□□□ -1.01
HMGN1-202ENST00000380747 FFAR3O14843 346 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms