RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 LIN7AO14910 233 aaPredicted RBP8.46□□□□□ -1.06
TPM3-213ENST00000368545 CEACAM5P06731 702 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 HIST1H2AGP0C0S8 130 aaPredicted RBP8.46□□□□□ -1.06
TPM3-213ENST00000368545 MSL3P1P0C860 447 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 HIST1H2ADP20671 130 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 CALB2P22676 271 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 RXRGP48443 463 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 PIK3CGP48736 1102 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 HNMTP50135 292 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 ADPRHP54922 357 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 PKNOX1P55347 436 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 TRIP6Q15654 476 aaKnown RBP8.46□□□□□ -1.06
TPM3-213ENST00000368545 MPEG1Q2M385 716 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 SLC9B1Q4ZJI4 515 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 ZNF385CQ66K41 422 aaPredicted RBP8.46□□□□□ -1.06
TPM3-213ENST00000368545 SYT13Q7L8C5 426 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 ADGRG6Q86SQ4 1221 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 TRAPPC5Q8IUR0 188 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 RPLP0P6Q8NHW5 317 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 MAPK15Q8TD08 544 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 AGAP11Q8TF27 550 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 SKA2Q8WVK7 121 aaPredicted RBP8.46□□□□□ -1.06
TPM3-213ENST00000368545 ASB11Q8WXH4 323 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 SLC35A4Q96G79 324 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 HIST1H2AHQ96KK5 128 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 ZNF382Q96SR6 550 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 HIST1H2AJQ99878 128 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 H2AFJQ9BTM1 129 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 SHCBP1LQ9BZQ2 653 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 MID1IP1Q9NPA3 183 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 UCKL1Q9NWZ5 548 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 WWOXQ9NZC7 414 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 LNPEPQ9UIQ6 1025 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 ADAMTS6Q9UKP5 1117 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 MMP17Q9ULZ9 603 aa8.46□□□□□ -1.06
TPM3-213ENST00000368545 SLC5A10A0PJK1 596 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 GFYI3L273 518 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 K7ESM1 405 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 UBFD1O14562 309 aaKnown RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 SLC22A2O15244 555 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 ESRRBO95718 433 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 CHEK2O96017 543 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 PCCBP05166 539 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 CTSCP53634 463 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 CDH13P55290 713 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 NCALDP61601 193 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 NKX6-1P78426 367 aaPredicted RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 CDK3Q00526 305 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 SGCGQ13326 291 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 DAG1Q14118 895 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 FGL2Q14314 439 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 RBBP7Q16576 425 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 PHKG1Q16816 387 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 INTS11Q5TA45 600 aaKnown RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 VWA5B1Q5TIE3 1220 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 KANK2Q63ZY3 851 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 RPS27LQ71UM5 84 aaKnown RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 HEATR4Q86WZ0 1026 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 PELI3Q8N2H9 469 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 BEND7Q8N7W2 519 aaPredicted RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 GLB1L3Q8NCI6 653 aaPredicted RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 CEP70Q8NHQ1 597 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 MCOLN3Q8TDD5 553 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 TRPC4APQ8TEL6 797 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 RHBDF1Q96CC6 855 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 FOPNLQ96NB1 174 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 CCT7Q99832 543 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 HGH1Q9BTY7 390 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 OR2AG1Q9H205 316 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 SEMA4BQ9NPR2 832 aaPredicted RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 PFDN4Q9NQP4 134 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 EIF2B4Q9UI10 523 aaKnown RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 MBD1Q9UIS9 605 aaPredicted RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 ZFR2Q9UPR6 939 aaKnown RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 SPAARA0A1B0GVQ0 90 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 CAPN14A8MX76 684 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 TMEM233B4DJY2 109 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 ANKRD65E5RJM6 399 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 AZIN1O14977 448 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 SKAP2O75563 359 aaPredicted RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 CRCPO75575 148 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 MATN4O95460 622 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 GUCA1CO95843 209 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 OTCP00480 354 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 CATP04040 527 aaKnown RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 ADSLP30566 484 aaPredicted RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 GGT5P36269 586 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 AGTR2P50052 363 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 NR0B2Q15466 257 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 WSCD2Q2TBF2 565 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 ZNF648Q5T619 568 aaPredicted RBP8.45□□□□□ -1.06
TPM3-213ENST00000368545 FAM180BQ6P0A1 224 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 CFAP161Q6P656 301 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 SLC36A4Q6YBV0 504 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 HORMAD1Q86X24 394 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 RASGRP3Q8IV61 690 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 SLC22A15Q8IZD6 547 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 PHOSPHO1Q8TCT1 267 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 HM13Q8TCT9 377 aa8.45□□□□□ -1.06
TPM3-213ENST00000368545 ACTRT2Q8TDY3 377 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms