RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 AVPR1BP47901 424 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 SLC6A12P48065 614 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 KCNC1P48547 511 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 CCR8P51685 355 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 SLC7A5Q01650 507 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 DLG1Q12959 904 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 MFAP5Q13361 173 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 OR4D1Q15615 310 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 NDUFA9Q16795 377 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 ZNF572Q7Z3I7 529 aaPredicted RBP15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 TMPRSS11BQ86T26 416 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 DNAJB14Q8TBM8 379 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 RHBDF1Q96CC6 855 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 CNDP1Q96KN2 507 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 CYTH2Q99418 400 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 RBBP8Q99708 897 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 HAUS8Q9BT25 410 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 OARD1Q9Y530 152 aa15.79■□□□□ 0.12
PDLIM7-201ENST00000355572 NCF1BA6NI72 391 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 NCF1CA8MVU1 366 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 MAN1A2O60476 641 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 WISP2O76076 250 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 ZNF888P0CJ79 500 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 NCF1P14598 390 aaPredicted RBP15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 PLTPP55058 493 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 RHAGQ02094 409 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 DEFB134Q4QY38 66 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 FCRLBQ6BAA4 426 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 ISLR2Q6UXK2 745 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 ANKRD37Q7Z713 158 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 KBTBD2Q8IY47 623 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 NKAPQ8N5F7 415 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 UTP15Q8TED0 518 aaKnown RBP15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 CREB3L4Q8TEY5 395 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 GPR22Q99680 433 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 NPAS2Q99743 824 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 LRRC4CQ9HCJ2 640 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 GPAMQ9HCL2 828 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 CTNNAL1Q9UBT7 734 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 SLC22A7Q9Y694 548 aa15.78■□□□□ 0.12
PDLIM7-201ENST00000355572 UTP20O75691 2785 aaKnown RBP15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 EIF3HO15372 352 aaKnown RBP eCLIP15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 GALR3O60755 368 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 SERPINA7P05543 415 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 SERPIND1P05546 499 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 C8orf89P0DMQ9 161 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 SMIM10L1P0DMW3 83 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 CD1DP15813 335 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 EPORP19235 508 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 HNF4AP41235 474 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 CDKL1Q00532 357 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 GUCY2DQ02846 1103 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 CALCOCO2Q13137 446 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 CSHL1Q14406 222 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 ZNF169Q14929 603 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 ZKSCAN8Q15776 578 aaPredicted RBP15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 KBTBD12Q3ZCT8 623 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 MINDY4Q4G0A6 757 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 MFSD4BQ5TF39 518 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 NXPE4Q6UWF7 544 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 VN1R5Q7Z5H4 357 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 CMC1Q7Z7K0 106 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 KLHDC8AQ8IYD2 350 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 NT5CQ8TCD5 201 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 SMIM10Q96HG1 83 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 TAAR6Q96RI8 345 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 EGFL8Q99944 293 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 TRIM54Q9BYV2 358 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 SLC6A16Q9GZN6 736 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 ANKHQ9HCJ1 492 aa15.77■□□□□ 0.12
PDLIM7-201ENST00000355572 LRRK2Q5S007 2527 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 A0A0G2JN53 185 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 CHST10O43529 356 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 WDR47O94967 919 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 SLC35G6P0C7Q6 338 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 CCDC166P0CW27 439 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 CD22P20273 847 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 CXCR2P25025 360 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 TSFMP43897 325 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 RAB8AP61006 207 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 BTG2P78543 158 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 USP10Q14694 798 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 TGFBIQ15582 683 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 SLCO4C1Q6ZQN7 724 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 C3orf62Q6ZUJ4 267 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 CPEB2Q7Z5Q1 589 aaKnown RBP15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 CCDC25Q86WR0 208 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 BBOF1Q8ND07 529 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 PRR7Q8TB68 274 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 GRHL3Q8TE85 626 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 ATL1Q8WXF7 558 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 ANKRD7Q92527 254 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 LRRC1Q9BTT6 524 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 DERL2Q9GZP9 239 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 EPS8L2Q9H6S3 715 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 PELI2Q9HAT8 420 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 POPDC3Q9HBV1 291 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 ZDHHC18Q9NUE0 388 aa15.76■□□□□ 0.11
PDLIM7-201ENST00000355572 RIC8BQ9NVN3 520 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms