RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 GLIS1Q8NBF1 620 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 PMM1Q92871 262 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 PNPLA2Q96AD5 504 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 LRRC58Q96CX6 371 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 PAAF1Q9BRP4 392 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 SLC39A3Q9BRY0 314 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 NALCNQ8IZF0 1738 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 FAM172BPA6NC97 362 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 ZMYND11Q15326 602 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 CRTC2Q53ET0 693 aaPredicted RBP15.16■□□□□ 0.02
TNXB-208ENST00000611016 PDSS1Q5T2R2 415 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 ZNF648Q5T619 568 aaPredicted RBP15.16■□□□□ 0.02
TNXB-208ENST00000611016 PNLDC1Q8NA58 520 aaKnown RBP15.16■□□□□ 0.02
TNXB-208ENST00000611016 OR10T2Q8NGX3 314 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 NSUN3Q9H649 340 aaKnown RBP15.16■□□□□ 0.02
TNXB-208ENST00000611016 NOS1APO75052 506 aaPredicted RBP15.16■□□□□ 0.02
TNXB-208ENST00000611016 XKP51811 444 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 ERMAPQ96PL5 475 aaPredicted RBP15.16■□□□□ 0.02
TNXB-208ENST00000611016 GPR22Q99680 433 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 GPR174Q9BXC1 333 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 KCNH6Q9H252 994 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 ADAM7Q9H2U9 754 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.16■□□□□ 0.02
TNXB-208ENST00000611016 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.16■□□□□ 0.02
TNXB-208ENST00000611016 HEXBP07686 556 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 SLC6A9P48067 706 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 MERTKQ12866 999 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 KIAA1161Q6NSJ0 714 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 TMCO2Q7Z6W1 182 aaPredicted RBP15.16■□□□□ 0.02
TNXB-208ENST00000611016 CCDC54Q8NEL0 328 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 PROKR2Q8NFJ6 384 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 TRIB3Q96RU7 358 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 IL21RQ9HBE5 538 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 GIN1Q9NXP7 522 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 FKBP7Q9Y680 259 aa15.16■□□□□ 0.02
TNXB-208ENST00000611016 SOCS5O75159 536 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 RFPL2O75678 378 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 CBX3Q13185 183 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 TCEAL1Q15170 157 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 ZNF630Q2M218 657 aaPredicted RBP15.15■□□□□ 0.02
TNXB-208ENST00000611016 MSS51Q4VC12 460 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 FRMD7Q6ZUT3 714 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 SCAMP4Q969E2 229 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 SLC2A11Q9BYW1 496 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 COQ10BQ9H8M1 238 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 CENPMQ9NSP4 180 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 RGPD8O14715 1765 aaPredicted RBP15.15■□□□□ 0.02
TNXB-208ENST00000611016 ZNF20P17024 532 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 GGT5P36269 586 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 RBM34P42696 430 aaKnown RBP15.15■□□□□ 0.02
TNXB-208ENST00000611016 SLC2A7Q6PXP3 512 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 DPY19L3Q6ZPD9 716 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 NFKBIDQ8NI38 313 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 SNIP1Q8TAD8 396 aaKnown RBP15.15■□□□□ 0.02
TNXB-208ENST00000611016 PKP4Q99569 1192 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 XKR8Q9H6D3 395 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 TEX264Q9Y6I9 313 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 ZNF142P52746 1687 aaPredicted RBP15.15■□□□□ 0.02
TNXB-208ENST00000611016 FAM72CH0Y354 149 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 GPX6P59796 221 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 MEF2AQ02078 507 aaPredicted RBP15.15■□□□□ 0.02
TNXB-208ENST00000611016 FAM72AQ5TYM5 149 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 FAM72DQ6L9T8 149 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 FAM72BQ86X60 149 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 ANKFN1Q8N957 763 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 PHOSPHO1Q8TCT1 267 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 SMARCD2Q92925 531 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 IGSF8Q969P0 613 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 CD244Q9BZW8 370 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 BRD7Q9NPI1 651 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 NCDNQ9UBB6 729 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 RIMKLBQ9ULI2 386 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 FAM221BA6H8Z2 402 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 FABP12A6NFH5 140 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 RNGTTO60942 597 aaKnown RBP15.15■□□□□ 0.02
TNXB-208ENST00000611016 EBLN1P0CF75 366 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 GDI2P50395 445 aaKnown RBP15.15■□□□□ 0.02
TNXB-208ENST00000611016 ID2Q02363 134 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 CEACAM20Q6UY09 585 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 C12orf40Q86WS4 652 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 MR1Q95460 341 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 KCTD7Q96MP8 289 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 OR2M4Q96R27 311 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 CGREF1Q99674 301 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 ACSL5Q9ULC5 683 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 PCDHB3Q9Y5E6 796 aa15.15■□□□□ 0.02
TNXB-208ENST00000611016 LCHNA4D1U4 455 aa15.14■□□□□ 0.01
TNXB-208ENST00000611016 DPPA5A6NC42 116 aa15.14■□□□□ 0.01
TNXB-208ENST00000611016 SMSP52788 366 aa15.14■□□□□ 0.01
TNXB-208ENST00000611016 TSPAN5P62079 268 aa15.14■□□□□ 0.01
TNXB-208ENST00000611016 CYP27C1Q4G0S4 372 aa15.14■□□□□ 0.01
TNXB-208ENST00000611016 RUNDC3AQ59EK9 446 aa15.14■□□□□ 0.01
TNXB-208ENST00000611016 PGBD2Q6P3X8 592 aa15.14■□□□□ 0.01
TNXB-208ENST00000611016 FBXO46Q6PJ61 603 aaPredicted RBP15.14■□□□□ 0.01
TNXB-208ENST00000611016 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.14■□□□□ 0.01
TNXB-208ENST00000611016 RPS27LQ71UM5 84 aaKnown RBP15.14■□□□□ 0.01
TNXB-208ENST00000611016 OR52E4Q8NGH9 312 aa15.14■□□□□ 0.01
TNXB-208ENST00000611016 TSPEARQ8WU66 669 aa15.14■□□□□ 0.01
TNXB-208ENST00000611016 HTRA1Q92743 480 aa15.14■□□□□ 0.01
TNXB-208ENST00000611016 OR52B2Q96RD2 323 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms