RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 CPNE9Q8IYJ1 553 aa17■□□□□ 0.31
HOMER3-208ENST00000595756 PPM1NQ8N819 430 aa17■□□□□ 0.31
HOMER3-208ENST00000595756 DNAJB14Q8TBM8 379 aa17■□□□□ 0.31
HOMER3-208ENST00000595756 C8orf44Q96CB5 159 aa17■□□□□ 0.31
HOMER3-208ENST00000595756 MMABQ96EY8 250 aaPredicted RBP17■□□□□ 0.31
HOMER3-208ENST00000595756 TSPAN17Q96FV3 270 aa17■□□□□ 0.31
HOMER3-208ENST00000595756 NDNQ99608 321 aa17■□□□□ 0.31
HOMER3-208ENST00000595756 ACSS3Q9H6R3 686 aa17■□□□□ 0.31
HOMER3-208ENST00000595756 SMYD2Q9NRG4 433 aa17■□□□□ 0.31
HOMER3-208ENST00000595756 ERRFI1Q9UJM3 462 aaPredicted RBP17■□□□□ 0.31
HOMER3-208ENST00000595756 SLC5A6Q9Y289 635 aa17■□□□□ 0.31
HOMER3-208ENST00000595756 PSAT1Q9Y617 370 aa17■□□□□ 0.31
HOMER3-208ENST00000595756 A0A087WUV0 522 aaPredicted RBP16.99■□□□□ 0.31
HOMER3-208ENST00000595756 FAM95CA0A1B0GW59 222 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 P2RX6O15547 441 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 FOXS1O43638 330 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 ACSL3O95573 720 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 LDLRP01130 860 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 C1QAP02745 245 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 HRH2P25021 359 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 SOX11P35716 441 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 EMP2P54851 167 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 TBPL1P62380 186 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 POU4F1Q01851 419 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 SP140Q13342 867 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 RBM20Q5T481 1227 aaKnown RBP16.99■□□□□ 0.31
HOMER3-208ENST00000595756 THEMIS2Q5TEJ8 643 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 PIWIL4Q7Z3Z4 852 aaKnown RBP16.99■□□□□ 0.31
HOMER3-208ENST00000595756 CNDP1Q96KN2 507 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 LMF1Q96S06 567 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 RBBP8Q99708 897 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 MCMBPQ9BTE3 642 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 ANKZF1Q9H8Y5 726 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 POPDC3Q9HBV1 291 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 CCDC177Q9NQR7 707 aaPredicted RBP16.99■□□□□ 0.31
HOMER3-208ENST00000595756 RIC8BQ9NVN3 520 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 SLC17A6Q9P2U8 582 aa16.99■□□□□ 0.31
HOMER3-208ENST00000595756 LOC102723996A0A087X1L8 192 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 IGHV1-45A0A0A0MS14 117 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 CXorf49A8MYA2 514 aaPredicted RBP16.98■□□□□ 0.31
HOMER3-208ENST00000595756 E2F3O00716 465 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 CYC1P08574 325 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 ABHD2P08910 425 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 PRR35P0CG20 571 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 CXCR2P25025 360 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 IL2P60568 153 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 CDC16Q13042 620 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 NDUFA9Q16795 377 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 WDR93Q6P2C0 686 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 RIPOR1Q6ZS17 1223 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 LAPTM4BQ86VI4 370 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 ZC3H7AQ8IWR0 971 aaKnown RBP16.98■□□□□ 0.31
HOMER3-208ENST00000595756 C5orf34Q96MH7 638 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 MRPS2Q9Y399 296 aaKnown RBP16.98■□□□□ 0.31
HOMER3-208ENST00000595756 IKBKGQ9Y6K9 419 aa16.98■□□□□ 0.31
HOMER3-208ENST00000595756 CELSR2Q9HCU4 2923 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 A0A0A6YYC8 382 aaPredicted RBP16.97■□□□□ 0.31
HOMER3-208ENST00000595756 I3L1I5 382 aaPredicted RBP16.97■□□□□ 0.31
HOMER3-208ENST00000595756 SERPINA7P05543 415 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 C8GP07360 202 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 HEXBP07686 556 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 EDN3P14138 238 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 AVPR1BP47901 424 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 CDKN2DP55273 166 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 RPS15AP62244 130 aaKnown RBP16.97■□□□□ 0.31
HOMER3-208ENST00000595756 AP2B1P63010 937 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 EEF1A2Q05639 463 aaKnown RBP16.97■□□□□ 0.31
HOMER3-208ENST00000595756 RPUSD3Q6P087 351 aaKnown RBP16.97■□□□□ 0.31
HOMER3-208ENST00000595756 PAQR3Q6TCH7 311 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 LINC00696Q6ZRV3 163 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 MYO1HQ8N1T3 1032 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 NKAPQ8N5F7 415 aaKnown RBP16.97■□□□□ 0.31
HOMER3-208ENST00000595756 CCDC138Q96M89 665 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 GPR22Q99680 433 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 YIPF2Q9BWQ6 316 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 PCBD2Q9H0N5 130 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 ABCF3Q9NUQ8 709 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 TMEM184CQ9NVA4 438 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 ITPR2Q14571 2701 aa16.97■□□□□ 0.31
HOMER3-208ENST00000595756 KCNE1BA0A087WTH5 132 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 A1L4Q6 167 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 H0YIG0 161 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 H7BY64 318 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 FFAR3O14843 346 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 GPR42O15529 346 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 KLHL18O94889 574 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 BMP10O95393 424 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 NSA2O95478 260 aaKnown RBP16.96■□□□□ 0.31
HOMER3-208ENST00000595756 PCOLCEQ15113 449 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 INAQ16352 499 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 HIST2H2BCQ6DN03 193 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 TMEM205Q6UW68 189 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 TAOK1Q7L7X3 1001 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 MAMDC2Q7Z304 686 aaPredicted RBP16.96■□□□□ 0.31
HOMER3-208ENST00000595756 VN1R4Q7Z5H5 301 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 PLD3Q8IV08 490 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 SPNS2Q8IVW8 549 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 MCOLN3Q8TDD5 553 aa16.96■□□□□ 0.31
HOMER3-208ENST00000595756 BRIX1Q8TDN6 353 aaKnown RBP16.96■□□□□ 0.31
HOMER3-208ENST00000595756 GRHL3Q8TE85 626 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms