RNA–Protein interactions for RNA: ENST00000595235.5

SSX4B-201, Transcript of SSX family member 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4B, Length 1,221 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4B-201ENST00000595235 CDKL1Q00532 357 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 REEP5Q00765 189 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 SLC7A5Q01650 507 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 PCOLCEQ15113 449 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 TSNQ15631 228 aaKnown RBP5.54□□□□□ -1.52
SSX4B-201ENST00000595235 INPP5JQ15735 1006 aaPredicted RBP5.54□□□□□ -1.52
SSX4B-201ENST00000595235 NDUFA9Q16795 377 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 CRB2Q5IJ48 1285 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 UBAP2Q5T6F2 1119 aaKnown RBP5.54□□□□□ -1.52
SSX4B-201ENST00000595235 IGFL2Q6UWQ7 119 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 IGFL3Q6UXB1 125 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 Q6ZS92 163 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 LANCL3Q6ZV70 420 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 ZNF572Q7Z3I7 529 aaPredicted RBP5.54□□□□□ -1.52
SSX4B-201ENST00000595235 MAATS1Q7Z4T9 603 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 TMPRSS11BQ86T26 416 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 CUZD1Q86UP6 607 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 THOC6Q86W42 341 aaKnown RBP5.54□□□□□ -1.52
SSX4B-201ENST00000595235 SPATA6LQ8N4H0 392 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 NKAPQ8N5F7 415 aaKnown RBP5.54□□□□□ -1.52
SSX4B-201ENST00000595235 ANKRD53Q8N9V6 530 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 CAMKVQ8NCB2 501 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 OR4K1Q8NGD4 311 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 OR5T3Q8NGG3 340 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 SLC5A11Q8WWX8 675 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 ATL1Q8WXF7 558 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 SNRNP40Q96DI7 357 aaKnown RBP5.54□□□□□ -1.52
SSX4B-201ENST00000595235 THAP11Q96EK4 314 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 C19orf60Q96EN9 201 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 C16orf45Q96MC5 204 aaPredicted RBP5.54□□□□□ -1.52
SSX4B-201ENST00000595235 GPR22Q99680 433 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 RBBP8Q99708 897 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 TMEM79Q9BSE2 394 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 HAUS8Q9BT25 410 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 SARGQ9BW04 601 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 RBCK1Q9BYM8 510 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 TRIM54Q9BYV2 358 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 TGIF2Q9GZN2 237 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 VN1R1Q9GZP7 353 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 AICDAQ9GZX7 198 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 LHPPQ9H008 270 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 POPDC3Q9HBV1 291 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 GPAMQ9HCL2 828 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 MKKSQ9NPJ1 570 aaPredicted RBP5.54□□□□□ -1.52
SSX4B-201ENST00000595235 SLAMF7Q9NQ25 335 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 NSMCE4AQ9NXX6 385 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 HCN3Q9P1Z3 774 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 CTNNAL1Q9UBT7 734 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 MKL2Q9ULH7 1088 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 SLC22A14Q9Y267 594 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 B3GNT3Q9Y2A9 372 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 NTNG1Q9Y2I2 539 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 UTP11Q9Y3A2 253 aaKnown RBP5.54□□□□□ -1.52
SSX4B-201ENST00000595235 BOD1L1Q8NFC6 3051 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 ZNF462Q96JM2 2506 aa5.54□□□□□ -1.52
SSX4B-201ENST00000595235 SCN3AQ9NY46 2000 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 DOCK10Q96BY6 2186 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 NSG1A0A0A6YYJ2 146 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 IGHV3-20A0A0C4DH32 117 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 NCF1BA6NI72 391 aaPredicted RBP5.53□□□□□ -1.52
SSX4B-201ENST00000595235 NCF1CA8MVU1 366 aaPredicted RBP5.53□□□□□ -1.52
SSX4B-201ENST00000595235 TCP11X1B4DZS4 312 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 TAPBPO15533 448 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 NDUFS4O43181 175 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 OR1F1O43749 312 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 PRAMEF4O60810 478 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 VPS4BO75351 444 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 CDC123O75794 336 aaPredicted RBP5.53□□□□□ -1.52
SSX4B-201ENST00000595235 KLHL18O94889 574 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 WDR47O94967 919 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 HEXBP07686 556 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 GSTA2P09210 222 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 SLC35G6P0C7Q6 338 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 PRR35P0CG20 571 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 ZNF888P0CJ79 500 aaPredicted RBP5.53□□□□□ -1.52
SSX4B-201ENST00000595235 CCDC166P0CW27 439 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 NCF1P14598 390 aaPredicted RBP5.53□□□□□ -1.52
SSX4B-201ENST00000595235 CD1DP15813 335 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 VARSP26640 1264 aaKnown RBP5.53□□□□□ -1.52
SSX4B-201ENST00000595235 GRK3P35626 688 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 SOX11P35716 441 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 GP5P40197 560 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 XCR1P46094 333 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 SCTRP47872 440 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 AVPR1BP47901 424 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 SLC6A12P48065 614 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 CCR8P51685 355 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 SLC12A2P55011 1212 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 OLR1P78380 273 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 POU4F1Q01851 419 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 CKAP4Q07065 602 aaKnown RBP5.53□□□□□ -1.52
SSX4B-201ENST00000595235 HYAL2Q12891 473 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 DLG1Q12959 904 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 MRPL49Q13405 166 aaKnown RBP5.53□□□□□ -1.52
SSX4B-201ENST00000595235 UBAP2LQ14157 1087 aaKnown RBP5.53□□□□□ -1.52
SSX4B-201ENST00000595235 CSHL1Q14406 222 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 USP10Q14694 798 aaKnown RBP5.53□□□□□ -1.52
SSX4B-201ENST00000595235 TGFBIQ15582 683 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 OR4D1Q15615 310 aa5.53□□□□□ -1.52
SSX4B-201ENST00000595235 ZKSCAN8Q15776 578 aaPredicted RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms