RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 LETMD1Q6P1Q0 360 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 UNQ6494/PRO21346Q6UXR6 183 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 FRMD7Q6ZUT3 714 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 L3MBTL4Q8NA19 623 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 TTC29Q8NA56 475 aaPredicted RBP18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 GALNT6Q8NCL4 622 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 OR4F6Q8NGB9 312 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 SLC13A3Q8WWT9 602 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 CLIP3Q96DZ5 547 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 C10orf90Q96M02 699 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 SLC7A5P2Q9GIP4 190 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 PITHD1Q9GZP4 211 aaPredicted RBP18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 DHCR7Q9UBM7 475 aaKnown RBP18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 DKK4Q9UBT3 224 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 ZNF225Q9UK10 706 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 SRPK3Q9UPE1 567 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 APC2O95996 2303 aa18.09■□□□□ 0.49
CLPTM1-209ENST00000588855 WDR91A4D1P6 747 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 HMGB1P1B2RPK0 211 aaPredicted RBP18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 STMND1H3BQB6 276 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 CAPNS1P04632 268 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 SERPIND1P05546 499 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 SLC35G6P0C7Q6 338 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 SNRPNP63162 240 aaKnown RBP18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 LCP2Q13094 533 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 GPS2Q13227 327 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 CPSF6Q16630 551 aaKnown RBP eCLIP18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 HIST2H2ACQ16777 129 aaPredicted RBP18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 HIST2H2AA3Q6FI13 130 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 MED27Q6P2C8 311 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 ZCCHC23Q6ZST2 131 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 TIPARPQ7Z3E1 657 aaKnown RBP18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 VN1R5Q7Z5H4 357 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 MILR1Q7Z6M3 343 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 SYVN1Q86TM6 617 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 DTWD1Q8N5C7 304 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 CAMKVQ8NCB2 501 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 MGARPQ8TDB4 240 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 CREB3L4Q8TEY5 395 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 ZNF382Q96SR6 550 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 NDC1Q9BTX1 674 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 CUTCQ9NTM9 273 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 MRPS2Q9Y399 296 aaKnown RBP18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 ZFHX4Q86UP3 3567 aa18.08■□□□□ 0.49
CLPTM1-209ENST00000588855 SEC16AO15027 2179 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 HYKKA2RU49 373 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 OR4F21O95013 312 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 MLYCDO95822 493 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 PCNAP12004 261 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 HPDP32754 393 aaPredicted RBP18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 WDR4P57081 412 aaKnown RBP18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 ASPHQ12797 758 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 RHBDD2Q6NTF9 364 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 TTLL10Q6ZVT0 673 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 LAS2Q8IYD9 372 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 ARHGEF39Q8N4T4 335 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 KCT2Q8NC54 265 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 TTLQ8NG68 377 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 OR7G3Q8NG95 312 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 NLNQ9BYT8 704 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 RHBGQ9H310 441 aa18.08■□□□□ 0.48
CLPTM1-209ENST00000588855 ANKDD1BA6NHY2 528 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 TXNDC9O14530 226 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 UBFD1O14562 309 aaKnown RBP18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 RAD1O60671 282 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 HBQ1P09105 142 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 RORAP35398 523 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 SLC18A1P54219 525 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 PCBP4P57723 403 aaKnown RBP18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 NAA20P61599 178 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 PWP1Q13610 501 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 GGTA1PQ4G0N0 100 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 C1orf189Q5VU69 101 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 C6orf15Q6UXA7 325 aaPredicted RBP18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 GPRIN3Q6ZVF9 776 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 NUDCD3Q8IVD9 361 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 TRPV3Q8NET8 790 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 ZCCHC10Q8TBK6 192 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 NT5CQ8TCD5 201 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 AGAP11Q8TF27 550 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 CCT6BQ92526 530 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 FGF11Q92914 225 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 UBE2E3Q969T4 207 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 PAIP2Q9BPZ3 127 aaKnown RBP18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 DRC3Q9H069 523 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 TXLNGQ9NUQ3 528 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 TRPS1Q9UHF7 1281 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 STK38LQ9Y2H1 464 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 SCN3AQ9NY46 2000 aa18.07■□□□□ 0.48
CLPTM1-209ENST00000588855 ACACAQ13085 2346 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 H0YIV9 168 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 FFAR3O14843 346 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 DSCR3O14972 297 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 BIRC5O15392 142 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 GPR42O15529 346 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 TBX6O95947 436 aaPredicted RBP18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 LIPCP11150 499 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 GSTM2P28161 218 aa18.06■□□□□ 0.48
CLPTM1-209ENST00000588855 ARSFP54793 590 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms