RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	NEIL2	Q969S2	332 aa		11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ALKBH8	Q96BT7	664 aa	Known RBP	11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	PYCR2	Q96C36	320 aa		11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	OR1F2P	Q96R84	312 aa		11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	WDR77	Q9BQA1	342 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	AIF1L	Q9BQI0	150 aa		11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	YIPF2	Q9BWQ6	316 aa		11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	SLC29A3	Q9BZD2	475 aa		11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	EPS8L2	Q9H6S3	715 aa		11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CNOT10	Q9H9A5	744 aa	Known RBP	11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	SMYD2	Q9NRG4	433 aa		11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ZFP69B	Q9UJL9	534 aa		11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	VPS4A	Q9UN37	437 aa		11.93	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	DOCK10	Q96BY6	2186 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	USP9X	Q93008	2570 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	IGHV1-45	A0A0A0MS14	117 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	FEZF1	A0PJY2	475 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CLEC18A	A5D8T8	446 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	KIF2A	O00139	706 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CDC7	O00311	574 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	OR1F1	O43749	312 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	LCMT2	O60294	686 aa	Known RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	C1QA	P02745	245 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	HPD	P32754	393 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	GGT5	P36269	586 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	AGTR2	P50052	363 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	MLLT10	P55197	1068 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	MRPS25	P82663	173 aa	Known RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	GUCY2D	Q02846	1103 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	INPP5J	Q15735	1006 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ZKSCAN8	Q15776	578 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	IGFBP7	Q16270	282 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CRB2	Q5IJ48	1285 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	C8orf74	Q6P047	294 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	NXPE4	Q6UWF7	544 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ZDHHC24	Q6UX98	284 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CLEC18B	Q6UXF7	455 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ISLR2	Q6UXK2	745 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ABHD13	Q7L211	337 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	LAPTM4B	Q86VI4	370 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	THOC6	Q86W42	341 aa	Known RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	SPNS2	Q8IVW8	549 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	C17orf53	Q8N3J3	647 aa	Predicted RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708		Q8NA96	180 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CLEC18C	Q8NCF0	446 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	MNS1	Q8NEH6	495 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	TTL	Q8NG68	377 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	OR9A4	Q8NGU2	314 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	OR51Q1	Q8NH59	317 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ANKRD49	Q8WVL7	239 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	RHBDF1	Q96CC6	855 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	UBXN10	Q96LJ8	280 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	EGFL8	Q99944	293 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	TUBB6	Q9BUF5	446 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ZNF700	Q9H0M5	742 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	GPRC5B	Q9NZH0	403 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	IKZF3	Q9UKT9	509 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	MKL2	Q9ULH7	1088 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	SH2B3	Q9UQQ2	575 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	PLAA	Q9Y263	795 aa		11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	MTO1	Q9Y2Z2	717 aa	Known RBP	11.92	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CNTRL	Q7Z7A1	2325 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	NPEPPSL1	A6NEC2	478 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CXorf49	A8MYA2	514 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	PYCARD-AS1	I3L0S3	204 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CDK2AP1	O14519	115 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	NDUFS4	O43181	175 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ALOX12B	O75342	701 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	H2AFY	O75367	372 aa	Known RBP	11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	C8orf89	P0DMQ9	161 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	COX6A1	P12074	109 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ALOX12	P18054	663 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CRABP2	P29373	138 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	SLC6A12	P48065	614 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	GPX6	P59796	221 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	RAB10	P61026	200 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	REEP5	Q00765	189 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	MFAP5	Q13361	173 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	RAPSN	Q13702	412 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	TGFBI	Q15582	683 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	TSN	Q15631	228 aa	Known RBP	11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	PLEKHN1	Q494U1	663 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	SULT1C3	Q6IMI6	304 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	GPSM1	Q86YR5	675 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	RELL1	Q8IUW5	271 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	TMEM151B	Q8IW70	566 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CTAGE3P	Q8IX95	158 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	PRSS58	Q8IYP2	241 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	KCT2	Q8NC54	265 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	KIAA1191	Q96A73	305 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	THOC3	Q96J01	351 aa	Known RBP	11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	CYTH2	Q99418	400 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	EHD1	Q9H4M9	534 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	NT5DC2	Q9H857	520 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	ZNF160	Q9HCG1	818 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	LRRC4C	Q9HCJ2	640 aa		11.91	□□□□□ -0.5
CDK5RAP3-222	ENST00000581708	COPG2	Q9UBF2	871 aa		11.91	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms