RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 A0A1B0GVI7 797 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 GPR89AB7ZAQ6 455 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 LILRB3O75022 631 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ZNF217O75362 1048 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ATG12O94817 140 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 TMEM63AO94886 807 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 PENKP01210 267 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-216ENST00000556083 GPR89BP0CG08 455 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 CCL5P13501 91 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 GBX1Q14549 363 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ALG10Q5BKT4 473 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 PITRM1Q5JRX3 1037 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ARL9Q6T311 187 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ZSWIM9Q86XI8 627 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 CEP97Q8IW35 865 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 C1orf52Q8N6N3 182 aaKnown RBP10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ING5Q8WYH8 240 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 TMEM121BQ9BXQ6 578 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-216ENST00000556083 OR51V1Q9H2C8 321 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 REEP4Q9H6H4 257 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ZFP57Q9NU63 452 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 KLHL42Q9P2K6 505 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 CD84Q9UIB8 345 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 PROM1O43490 865 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 GPR37L1O60883 481 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 SYNGR4O95473 234 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 HOXB9P17482 250 aaPredicted RBP10.4□□□□□ -0.74
ACTN1-216ENST00000556083 GRIA2P42262 883 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 ADAM15Q13444 863 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 OCLNQ16625 522 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 TCTE1Q5JU00 501 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 VWA5B1Q5TIE3 1220 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 LRRN1Q6UXK5 716 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 TPT1P8Q9HAU6 139 aa10.4□□□□□ -0.74
ACTN1-216ENST00000556083 GRXCR2A6NFK2 248 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 DISC1C4P0D8 188 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 SLC19A2O60779 497 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 MRPS14O60783 128 aaKnown RBP10.4□□□□□ -0.75
ACTN1-216ENST00000556083 PGLSO95336 258 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 GALTP07902 379 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 TYRP14679 529 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 DHPSP49366 369 aaPredicted RBP10.4□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF84P51523 738 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 RPS15AP62244 130 aaKnown RBP10.4□□□□□ -0.75
ACTN1-216ENST00000556083 SLC25A11Q02978 314 aaKnown RBP10.4□□□□□ -0.75
ACTN1-216ENST00000556083 GALNT1Q10472 559 aaPredicted RBP10.4□□□□□ -0.75
ACTN1-216ENST00000556083 CLCA4Q14CN2 919 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 TOR1AIP1Q5JTV8 583 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 TPRG1LQ5T0D9 272 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 LPCAT4Q643R3 524 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 EPGNQ6UW88 154 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 KCTD8Q6ZWB6 473 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 ZER1Q7Z7L7 766 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 TIGD4Q8IY51 512 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 SPAG16Q8N0X2 631 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 LRTOMTQ8WZ04 291 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 GTPBP3Q969Y2 492 aaKnown RBP10.4□□□□□ -0.75
ACTN1-216ENST00000556083 SLC45A3Q96JT2 553 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 MTERF1Q99551 399 aaKnown RBP10.4□□□□□ -0.75
ACTN1-216ENST00000556083 HERPUD2Q9BSE4 406 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 DPAGT1Q9H3H5 408 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 AKTIPQ9H8T0 292 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 CLDND1Q9NY35 253 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 NUFIP1Q9UHK0 495 aaKnown RBP10.4□□□□□ -0.75
ACTN1-216ENST00000556083 TMEM59LQ9UK28 342 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 PCDHAC2Q9Y5I4 1007 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 DNMT3AQ9Y6K1 912 aaPredicted RBP10.4□□□□□ -0.75
ACTN1-216ENST00000556083 KNDC1Q76NI1 1749 aa10.4□□□□□ -0.75
ACTN1-216ENST00000556083 C1orf226A1L170 272 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 BLACEA4D250 179 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 NDUFS4O43181 175 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 PRKYO43930 277 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 FGF18O76093 207 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 LEPRP48357 1165 aaKnown RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 PGDP52209 483 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 KIAA0319Q5VV43 1072 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 GLT8D1Q68CQ7 371 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 ULK3Q6PHR2 472 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 ERMP1Q7Z2K6 904 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 MMAAQ8IVH4 418 aaKnown RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 SLC2A13Q96QE2 648 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 FGFBP2Q9BYJ0 223 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 TPK1Q9H3S4 243 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 ARL5AQ9Y689 179 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 LRRC37A3O60309 1634 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 FAAHO00519 579 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 ARPC2O15144 300 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 FAM155BO75949 473 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 HRGP04196 525 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 UGT1A1P22309 533 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 GSCP56915 257 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 POU6F2P78424 691 aaPredicted RBP10.39□□□□□ -0.75
ACTN1-216ENST00000556083 ZNF234Q14588 700 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 GPRC6AQ5T6X5 926 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 MANEALQ5VSG8 457 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 ALG1LQ6GMV1 187 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 SERINC5Q86VE9 423 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 TOR1AIP2Q8NFQ8 470 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 OR6K6Q8NGW6 343 aa10.39□□□□□ -0.75
ACTN1-216ENST00000556083 RPL10LQ96L21 214 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms