RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 ARHGEF39Q8N4T4 335 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 BANPQ8N9N5 519 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 TTC29Q8NA56 475 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-215ENST00000554656 C2CD4AQ8NCU7 369 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-215ENST00000554656 ST6GALNAC3Q8NDV1 305 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 STT3BQ8TCJ2 826 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 GRHL3Q8TE85 626 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 TM9SF4Q92544 642 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 LPGAT1Q92604 370 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 ZUFSPQ96AP4 578 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 RAD51AP1Q96B01 352 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 FAM136AQ96C01 138 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 C8orf44Q96CB5 159 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 MRRFQ96E11 262 aaKnown RBP10.07□□□□□ -0.8
SHMT2-215ENST00000554656 APOPT1Q96IL0 206 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 CRB3Q9BUF7 120 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 LHPPQ9H008 270 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 SEMA3GQ9NS98 782 aa10.07□□□□□ -0.8
SHMT2-215ENST00000554656 IARS2Q9NSE4 1012 aaKnown RBP10.07□□□□□ -0.8
SHMT2-215ENST00000554656 INTS9Q9NV88 658 aaKnown RBP10.07□□□□□ -0.8
SHMT2-215ENST00000554656 NXT1Q9UKK6 140 aaKnown RBP10.07□□□□□ -0.8
SHMT2-215ENST00000554656 SCN2AQ99250 2005 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 IGLV3-12A0A075B6K2 115 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 A0A1W2PPM1 405 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 HYKKA2RU49 373 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 FFAR3O14843 346 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 GPR42O15529 346 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 KLHL41O60662 606 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 NDUFS3O75489 264 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 MATN4O95460 622 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 GSTA1P08263 222 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 ZGLP1P0C6A0 271 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 PIM1P11309 404 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-215ENST00000554656 KRT4P19013 534 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 PPARGP37231 505 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-215ENST00000554656 SERPINB8P50452 374 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 GNGT1P63211 74 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 ZNF169Q14929 603 aaPredicted RBP10.06□□□□□ -0.8
SHMT2-215ENST00000554656 ACSBG2Q5FVE4 666 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 AGAP7PQ5VUJ5 663 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 FBXO42Q6P3S6 717 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 OTOAQ7RTW8 1153 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 CCDC91Q7Z6B0 441 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 STRA8Q7Z7C7 330 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 LAPTM4BQ86VI4 370 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 CATSPER1Q8NEC5 780 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 PSMF1Q92530 271 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 THOC3Q96J01 351 aaKnown RBP10.06□□□□□ -0.8
SHMT2-215ENST00000554656 C5orf34Q96MH7 638 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 AGAP4Q96P64 663 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 PANX3Q96QZ0 392 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 TCF12Q99081 682 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 GPR22Q99680 433 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 SLC30A3Q99726 388 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 DPH7Q9BTV6 452 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 ACAT2Q9BWD1 397 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 ZNF304Q9HCX3 659 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 KCNK9Q9NPC2 374 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 SPATA7Q9P0W8 599 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 FBXO5Q9UKT4 447 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 VPS9D1Q9Y2B5 631 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 PSAT1Q9Y617 370 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 MYO7BQ6PIF6 2116 aa10.06□□□□□ -0.8
SHMT2-215ENST00000554656 HMX2A2RU54 273 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 H0YGG7 62 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 COPEO14579 308 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 PFDN6O15212 129 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 SRPX2O60687 465 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-215ENST00000554656 PIAS1O75925 651 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 HPP00738 406 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 EIF2S1P05198 315 aaKnown RBP10.05□□□□□ -0.8
SHMT2-215ENST00000554656 CELA2AP08217 269 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 PYGBP11216 843 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 COX6A1P12074 109 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 ACPPP15309 386 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 CREB1P16220 341 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 FMO4P31512 558 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 LSP1P33241 339 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 CRHR1P34998 444 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 SOX11P35716 441 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 CCT5P48643 541 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 ARF3P61204 181 aaPredicted RBP10.05□□□□□ -0.8
SHMT2-215ENST00000554656 MFAP5Q13361 173 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 FAM214AQ32MH5 1076 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 VWA2Q5GFL6 755 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 MROH9Q5TGP6 573 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 ATG9BQ674R7 924 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 ZNF425Q6IV72 752 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 MRNIPQ6NTE8 343 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 SUSD1Q6UWL2 747 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 ISLR2Q6UXK2 745 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 LINC00696Q6ZRV3 163 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 ZC3HC1Q86WB0 502 aaKnown RBP10.05□□□□□ -0.8
SHMT2-215ENST00000554656 PAQR7Q86WK9 346 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 SHISA5Q8N114 240 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 C4orf33Q8N1A6 199 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 AMER3Q8N944 861 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 GIMAP7Q8NHV1 300 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 DNAJB14Q8TBM8 379 aa10.05□□□□□ -0.8
SHMT2-215ENST00000554656 SKA2Q8WVK7 121 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms