RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 EFNA3P52797 238 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 MAPK10P53779 464 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 PPP2R2AP63151 447 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 MC2RQ01718 297 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 IRF8Q02556 426 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 PCDH1Q08174 1060 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 BST1Q10588 318 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 RBBP5Q15291 538 aaKnown RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 ZRSR2Q15696 482 aaKnown RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 RBBP7Q16576 425 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 CPSF6Q16630 551 aaKnown RBP eCLIP6.19□□□□□ -1.42
CD44-214ENST00000525211 PRTGQ2VWP7 1150 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 UGT3A2Q3SY77 523 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 SGO1Q5FBB7 561 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 XKR6Q5GH73 641 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 COX20Q5RI15 118 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 FAM69BQ5VUD6 431 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 ATG9BQ674R7 924 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 CLEC6AQ6EIG7 209 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 PWWP2BQ6NUJ5 590 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 TMEM214Q6NUQ4 689 aaKnown RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 RAB11FIP2Q7L804 512 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 TIPARPQ7Z3E1 657 aaKnown RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 MAVSQ7Z434 540 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 ADCK2Q7Z695 626 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 LCA5Q86VQ0 697 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 TMPRSS12Q86WS5 348 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 NUDCD3Q8IVD9 361 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 TCAIMQ8N3R3 496 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 METTL27Q8N6F8 245 aaPredicted RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 CDYL2Q8N8U2 506 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 L3MBTL4Q8NA19 623 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 KCT2Q8NC54 265 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 WDR20Q8TBZ3 569 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 RDH11Q8TC12 318 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 AGR3Q8TD06 166 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 ZNF75CPQ92670 426 aaPredicted RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 USP7Q93009 1102 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 UCN3Q969E3 161 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 TM4SF19Q96DZ7 209 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 LIN37Q96GY3 246 aaPredicted RBP6.19□□□□□ -1.42
CD44-214ENST00000525211 ZNF285Q96NJ3 590 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 CD180Q99467 661 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 MESP1Q9BRJ9 268 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 SCNM1Q9BWG6 230 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 SPRY4Q9C004 299 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 EPB41L1Q9H4G0 881 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 PELI2Q9HAT8 420 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 LHX9Q9NQ69 397 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 SLC22A11Q9NSA0 550 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 FGF21Q9NSA1 209 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 TMEM184CQ9NVA4 438 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 PNPOQ9NVS9 261 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 SOHLH2Q9NX45 425 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 ZNF232Q9UNY5 417 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 DYRK1BQ9Y463 629 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 FRYQ5TBA9 3013 aa6.19□□□□□ -1.42
CD44-214ENST00000525211 FREM2Q5SZK8 3169 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ASPMQ8IZT6 3477 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 TRBC2A0A5B9 178 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 TRABD2BA6NFA1 517 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 OR2W5A6NFC9 320 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 GOLGA6L10A6NI86 522 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ZNF839A8K0R7 811 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SAP18O00422 153 aaKnown RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 RTCAO00442 366 aaKnown RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 MANBAO00462 879 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 PLD2O14939 933 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 CLGNO14967 610 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 TM9SF1O15321 606 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ZW10O43264 779 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 FOXS1O43638 330 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 CNOT3O75175 753 aaKnown RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 ZWINTO95229 277 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 TGFB1P01137 390 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 AVPP01185 164 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 NTRK1P04629 796 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SERPINE1P05121 402 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 EIF2S1P05198 315 aaKnown RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 CAPN1P07384 714 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 EPB42P16452 691 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 HNF4AP41235 474 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 CCR8P51685 355 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 CCNG1P51959 295 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SLC18A1P54219 525 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 RPS13P62277 151 aaKnown RBP6.18□□□□□ -1.42
CD44-214ENST00000525211 HSD11B2P80365 405 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 ABATP80404 500 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 OCRLQ01968 901 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 FOXM1Q08050 763 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SF3A3Q12874 501 aaKnown RBP eCLIP6.18□□□□□ -1.42
CD44-214ENST00000525211 TRA2AQ13595 282 aaKnown RBP eCLIP6.18□□□□□ -1.42
CD44-214ENST00000525211 RCN2Q14257 317 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 TGIF1Q15583 401 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 SYT16Q17RD7 645 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 WASHC2DQ5SRD0 308 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 HHATQ5VTY9 493 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 C1orf189Q5VU69 101 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 GRHL2Q6ISB3 625 aa6.18□□□□□ -1.42
CD44-214ENST00000525211 CGB2Q6NT52 195 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms