RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 SCTRP47872 440 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 AP2B1P63010 937 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 REEP5Q00765 189 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 CDC16Q13042 620 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 TMPRSS11BQ86T26 416 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 PTRH1Q86Y79 214 aaKnown RBP18.87■□□□□ 0.61
SFXN1-209ENST00000508290 FDCSPQ8NFU4 85 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 CDC42EP4Q9H3Q1 356 aaKnown RBP18.87■□□□□ 0.61
SFXN1-209ENST00000508290 WWOXQ9NZC7 414 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 C3orf18Q9UK00 162 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 RNF112Q9ULX5 631 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 IKBKGQ9Y6K9 419 aa18.87■□□□□ 0.61
SFXN1-209ENST00000508290 FEZF1A0PJY2 475 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 SYCE1LA8MT33 242 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 MAP2K7O14733 419 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 NDUFS4O43181 175 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 STK16O75716 305 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 LTA4HP09960 611 aaKnown RBP18.86■□□□□ 0.61
SFXN1-209ENST00000508290 ATXN8OSP0DMR3 200 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 ACPPP15309 386 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 CNTFP26441 200 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 SERPINB9P50453 376 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 FAM83EQ2M2I3 478 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 CATSPEREQ5SY80 951 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 KIRREL2Q6UWL6 708 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 ABHD13Q7L211 337 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 RHEBL1Q8TAI7 183 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 NT5CQ8TCD5 201 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 TSNARE1Q96NA8 513 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 YIPF2Q9BWQ6 316 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 NUDT4Q9NZJ9 180 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 CD274Q9NZQ7 290 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 COPG2Q9UBF2 871 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 FBXL4Q9UKA2 621 aa18.86■□□□□ 0.61
SFXN1-209ENST00000508290 IDSB3KWA1 339 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 SOCS6O14544 535 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 LCMT2O60294 686 aaKnown RBP18.85■□□□□ 0.61
SFXN1-209ENST00000508290 KERAO60938 352 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 FAM155BO75949 473 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 HPP00738 406 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 HEXBP07686 556 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 INHBAP08476 426 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 SERPINB8P50452 374 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 EMP2P54851 167 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 VWA2Q5GFL6 755 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 ATG9BQ674R7 924 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 KLC3Q6P597 504 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 KRT78Q8N1N4 520 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 AFAP1L2Q8N4X5 818 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 OR11G2Q8NGC1 345 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 OR9A4Q8NGU2 314 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 NT5DC2Q9H857 520 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 DNAJC11Q9NVH1 559 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 HEATR5BQ9P2D3 2071 aa18.85■□□□□ 0.61
SFXN1-209ENST00000508290 KRT38O76015 456 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 C1GALT1C1LP0DN25 315 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 TFEBP19484 476 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 ECHS1P30084 290 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 EFTUD2Q15029 972 aaKnown RBP eCLIP18.84■□□□□ 0.613e-8■■□□□ 14.1
SFXN1-209ENST00000508290 OR4D1Q15615 310 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 SLCO4C1Q6ZQN7 724 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 SHISA6Q6ZSJ9 500 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 LRRC70Q7Z2Q7 622 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 CMC1Q7Z7K0 106 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 ISCA2Q86U28 154 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 ZC3H7AQ8IWR0 971 aaKnown RBP18.84■□□□□ 0.61
SFXN1-209ENST00000508290 DTWD1Q8N5C7 304 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 KCT2Q8NC54 265 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 SLC44A1Q8WWI5 657 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 OR1F2PQ96R84 312 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 NUDT9Q9BW91 350 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 SNX15Q9NRS6 342 aa18.84■□□□□ 0.61
SFXN1-209ENST00000508290 C19orf25Q9UFG5 118 aaPredicted RBP18.84■□□□□ 0.61
SFXN1-209ENST00000508290 PTBP2Q9UKA9 531 aaKnown RBP18.84■□□□□ 0.61
SFXN1-209ENST00000508290 A0A087WUV0 522 aaPredicted RBP18.83■□□□□ 0.6
SFXN1-209ENST00000508290 NCF1BA6NI72 391 aaPredicted RBP18.83■□□□□ 0.6
SFXN1-209ENST00000508290 A6NL46 340 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 NCF1CA8MVU1 366 aaPredicted RBP18.83■□□□□ 0.6
SFXN1-209ENST00000508290 CLGNO14967 610 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 BMP10O95393 424 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 ACSL3O95573 720 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 SERPINA6P08185 405 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 NCF1P14598 390 aaPredicted RBP18.83■□□□□ 0.6
SFXN1-209ENST00000508290 ALOX12P18054 663 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 IL1RNP18510 177 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 VARSP26640 1264 aaKnown RBP18.83■□□□□ 0.6
SFXN1-209ENST00000508290 CSRP3P50461 194 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 LAPTM5Q13571 262 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 ACAP2Q15057 778 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 UAP1Q16222 522 aaPredicted RBP18.83■□□□□ 0.6
SFXN1-209ENST00000508290 PDK4Q16654 411 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 PAGE2BQ5JRK9 111 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 MROH9Q5TGP6 573 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 IGFL3Q6UXB1 125 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 TMIGD1Q6UXZ0 262 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 TRMT10CQ7L0Y3 403 aaKnown RBP18.83■□□□□ 0.6
SFXN1-209ENST00000508290 NDUFAF7Q7L592 441 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 SPATA6LQ8N4H0 392 aa18.83■□□□□ 0.6
SFXN1-209ENST00000508290 EIF1ADQ8N9N8 165 aaKnown RBP18.83■□□□□ 0.6
SFXN1-209ENST00000508290 METTL21AQ8WXB1 218 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms