RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 C3orf14Q9HBI5 128 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 KLK4Q9Y5K2 254 aa12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 TNPO3Q9Y5L0 923 aaKnown RBP12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 LAMA2P24043 3122 aaKnown RBP12.64□□□□□ -0.39
GAPVD1-220ENST00000497580 PRAMEF33A0A0G2JMD5 474 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 SMIM28A0A1B0GU29 152 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 C19orf81C9J6K1 198 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 LRRTM2O43300 516 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 MRPS14O60783 128 aaKnown RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 PRAMEF10O60809 474 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 ULK1O75385 1050 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 LGALS2P05162 132 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 KDELR2P33947 212 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 FEN1P39748 380 aaKnown RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 RENBPP51606 427 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 LRRC32Q14392 662 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 ZNF551Q7Z340 670 aaPredicted RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 PANX1Q96RD7 426 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 NIPSNAP1Q9BPW8 284 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 POLR2J2Q9GZM3 115 aaKnown RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 PIM2Q9P1W9 311 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 KLHL21Q9UJP4 597 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 A0A075B6Q4 140 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 ARSBP15848 533 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 ENGP17813 658 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 AKR1D1P51857 326 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 MLLT6P55198 1093 aaPredicted RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 RGS1Q08116 209 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 KYAT1Q16773 422 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 TOR1AIP1Q5JTV8 583 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 XKRXQ6PP77 449 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 ASB18Q6ZVZ8 466 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 RGL4Q8IZJ4 473 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 Q8N402 240 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 SCAMP5Q8TAC9 235 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 CEP76Q8TAP6 659 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 CRTAC1Q9NQ79 661 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 ZNF226Q9NYT6 803 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 DNAJC27Q9NZQ0 273 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 STOML2Q9UJZ1 356 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 RPS6KA6Q9UK32 745 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 SSR3Q9UNL2 185 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 MYLKQ15746 1914 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 H3BRB1 525 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 STX16O14662 325 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 APOL3O95236 402 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 PRKAR1AP10644 381 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 CPN2P22792 545 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 ZNF81P51508 661 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 RPL6Q02878 288 aaKnown RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 C2orf80Q0P641 193 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 ABHD18Q0P651 414 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 LARS2Q15031 903 aaKnown RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 KIAA0040Q15053 153 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 GPR68Q15743 365 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 SMYD5Q6GMV2 418 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 MZT2BQ6NZ67 158 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 CIR1Q86X95 450 aaPredicted RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 DNAJA4Q8WW22 397 aaPredicted RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 UPRTQ96BW1 309 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 ASIC4Q96FT7 647 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 DCLRE1CQ96SD1 692 aaKnown RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 EBPLQ9BY08 206 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 HDHD2Q9H0R4 259 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 GABARAPL1Q9H0R8 117 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 WWOXQ9NZC7 414 aa12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 AFF4Q9UHB7 1163 aaKnown RBP12.63□□□□□ -0.39
GAPVD1-220ENST00000497580 OR5K3A6NET4 321 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 INMT-MINDY4F8WBC2 141 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 IFRD1O00458 451 aaPredicted RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 NUDT7P0C024 238 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 RPL34P49207 117 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 ATN1P54259 1190 aaPredicted RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 LILRA4P59901 499 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 RAB14P61106 215 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 RRAS2P62070 204 aaPredicted RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 TNK1Q13470 666 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 KIAA1841Q6NSI8 718 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 KIF18BQ86Y91 864 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 NKAPQ8N5F7 415 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 IMP4Q96G21 291 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 CDKN2AIPNLQ96HQ2 116 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 PGAP2Q9UHJ9 254 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 DLGAP4Q9Y2H0 992 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 TRAV6A0A075B6T7 132 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 GPR182O15218 404 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 TOXO94900 526 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 BCKDHAP12694 445 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 SRP54P61011 504 aaKnown RBP12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 FCN2Q15485 313 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 UAP1L1Q3KQV9 507 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 SV2CQ496J9 727 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 KLHL12Q53G59 568 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 DDI2Q5TDH0 399 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 BRAT1Q6PJG6 821 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 PAQR6Q6TCH4 344 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 PLPPR4Q7Z2D5 763 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 LGI4Q8N135 537 aa12.62□□□□□ -0.39
GAPVD1-220ENST00000497580 DNAJC5GQ8N7S2 189 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms