RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 IGHV1-45A0A0A0MS14 117 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 FEZF1A0PJY2 475 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 FFAR3O14843 346 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 GPR42O15529 346 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 NDUFS4O43181 175 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 BMP10O95393 424 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 STATHP02808 62 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 C8orf89P0DMQ9 161 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 IL1RNP18510 177 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 MRPS25P82663 173 aaKnown RBP14.89□□□□□ -0.03
HDAC4-213ENST00000496347 CKAP4Q07065 602 aaKnown RBP14.89□□□□□ -0.03
HDAC4-213ENST00000496347 Q0VFX4 171 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 PWP1Q13610 501 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 UBAP2LQ14157 1087 aaKnown RBP14.89□□□□□ -0.03
HDAC4-213ENST00000496347 ZNF460Q14592 562 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 CRB2Q5IJ48 1285 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 B3GNTL1Q67FW5 361 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-213ENST00000496347 ISLR2Q6UXK2 745 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 SYT10Q6XYQ8 523 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 CAPN12Q6ZSI9 719 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 FRA10AC1Q70Z53 315 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 LAPTM4BQ86VI4 370 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 C17orf53Q8N3J3 647 aaPredicted RBP14.89□□□□□ -0.03
HDAC4-213ENST00000496347 ZCCHC10Q8TBK6 192 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 SLC13A3Q8WWT9 602 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 NEIL2Q969S2 332 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 C8orf44Q96CB5 159 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 THOC3Q96J01 351 aaKnown RBP14.89□□□□□ -0.03
HDAC4-213ENST00000496347 DERL2Q9GZP9 239 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 PELI2Q9HAT8 420 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 MKL2Q9ULH7 1088 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 DYRK1BQ9Y463 629 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 SVILO95425 2214 aa14.89□□□□□ -0.03
HDAC4-213ENST00000496347 FAM159BA6NKW6 160 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 CDC7O00311 574 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 WISP3O95389 354 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-213ENST00000496347 SERPINA7P05543 415 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 IL10P22301 178 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 SSTR1P30872 391 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 AHRP35869 848 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 GP5P40197 560 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 XCR1P46094 333 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 UQCRFS1P47985 274 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 MAT1AQ00266 395 aaKnown RBP14.88□□□□□ -0.03
HDAC4-213ENST00000496347 REEP5Q00765 189 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 EEF1A2Q05639 463 aaKnown RBP14.88□□□□□ -0.03
HDAC4-213ENST00000496347 RGS1Q08116 209 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 MFAP5Q13361 173 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 CSHL1Q14406 222 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 SYT16Q17RD7 645 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 PLEKHN1Q494U1 663 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-213ENST00000496347 TMEM205Q6UW68 189 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 PRSS41Q7RTY9 318 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 CEP97Q8IW35 865 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 PARP9Q8IXQ6 854 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 AFAP1L2Q8N4X5 818 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 TSNARE1Q96NA8 513 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 OR1F2PQ96R84 312 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 GPR22Q99680 433 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 RBBP8Q99708 897 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 MESP1Q9BRJ9 268 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 VN1R1Q9GZP7 353 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 ZNF700Q9H0M5 742 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 ZBTB20Q9HC78 741 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-213ENST00000496347 SMYD2Q9NRG4 433 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 CTNNAL1Q9UBT7 734 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 C19orf25Q9UFG5 118 aaPredicted RBP14.88□□□□□ -0.03
HDAC4-213ENST00000496347 KCNE2Q9Y6J6 123 aa14.88□□□□□ -0.03
HDAC4-213ENST00000496347 UTP20O75691 2785 aaKnown RBP14.87□□□□□ -0.03
HDAC4-213ENST00000496347 OR1F1O43749 312 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 KLHL18O94889 574 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 PRR35P0CG20 571 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 GNLYP22749 145 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 STX2P32856 288 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 SCTRP47872 440 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 SNRPNP63162 240 aaKnown RBP14.87□□□□□ -0.03
HDAC4-213ENST00000496347 NAB1Q13506 487 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 TLR1Q15399 786 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 TSNQ15631 228 aaKnown RBP14.87□□□□□ -0.03
HDAC4-213ENST00000496347 MINDY4Q4G0A6 757 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 ABHD13Q7L211 337 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 TMPRSS11BQ86T26 416 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 CUZD1Q86UP6 607 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 THOC6Q86W42 341 aaKnown RBP14.87□□□□□ -0.03
HDAC4-213ENST00000496347 PDSS2Q86YH6 399 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 KLHDC8AQ8IYD2 350 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 TCAIMQ8N3R3 496 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 KCT2Q8NC54 265 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 ZNF740Q8NDX6 193 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 OR51Q1Q8NH59 317 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 NT5CQ8TCD5 201 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 FBXO25Q8TCJ0 367 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 ANKRD49Q8WVL7 239 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 METTL21AQ8WXB1 218 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 LMF1Q96S06 567 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 EGFL8Q99944 293 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 AIF1LQ9BQI0 150 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 HCN3Q9P1Z3 774 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 MAP10Q9P2G4 905 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 ZFP69BQ9UJL9 534 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms