RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 SCYL1Q96KG9 808 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 CNDP1Q96KN2 507 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 FOPNLQ96NB1 174 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 MRPL57Q9BQC6 102 aaKnown RBP11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 OR52A5Q9H2C5 316 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 MRPL46Q9H2W6 279 aaKnown RBP11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 SLC6A20Q9NP91 592 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 IFT80Q9P2H3 777 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 ICKQ9UPZ9 632 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 PLLPQ9Y342 182 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 COLEC10Q9Y6Z7 277 aa11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 MAP1AP78559 2803 aaPredicted RBP11.24□□□□□ -0.61
CSNK1E-212ENST00000494610 PCM1Q15154 2024 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 PEX12O00623 359 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 HNRNPRO43390 633 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 SPAG7O75391 227 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 WISP3O95389 354 aaPredicted RBP11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 F7P08709 466 aaPredicted RBP11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 MPC1LP0DKB6 136 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 UGT2B7P16662 529 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 AOAHP28039 575 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 KCNK10P57789 538 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 NAA20P61599 178 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 BOP1Q14137 746 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 MRPL14Q6P1L8 145 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 PAQR3Q6TCH7 311 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 SPESP1Q6UW49 350 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 AMIGO1Q86WK6 493 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 CARFQ8N187 725 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 C19orf47Q8N9M1 422 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 OR5AR1Q8NGP9 310 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 OR2Y1Q8NGV0 311 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 FLVCR1-AS1Q8TAF5 88 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 RHEBL1Q8TAI7 183 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 DNAJB14Q8TBM8 379 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 RAB3IL1Q8TBN0 382 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 KCTD4Q8WVF5 259 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 ZFPM2Q8WW38 1151 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 ZBTB9Q96C00 473 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 LINGO1Q96FE5 620 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 UBXN10Q96LJ8 280 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 FER1L6-AS2Q96M78 137 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 FAM111AQ96PZ2 611 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 OR2A14Q96R47 310 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 TFB2MQ9H5Q4 396 aaKnown RBP11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 COG4Q9H9E3 785 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 CIDEBQ9UHD4 219 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 GPN3Q9UHW5 284 aaPredicted RBP11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 FBXL4Q9UKA2 621 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 ENTPD4Q9Y227 616 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 PADI2Q9Y2J8 665 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 PRSS21Q9Y6M0 314 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 PCNX1Q96RV3 2341 aa11.23□□□□□ -0.61
CSNK1E-212ENST00000494610 SOCS6O14544 535 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 BIRC5O15392 142 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 PLIN3O60664 434 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 KERAO60938 352 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 SMIM24O75264 130 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 WISP2O76076 250 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 S100BP04271 92 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 RPN2P04844 631 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 ALPPP05187 535 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 C8GP07360 202 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 ENO2P09104 434 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 MSL3P1P0C860 447 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 CHN1P15882 459 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 NDUFS1P28331 727 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 PEBP1P30086 187 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 RPA3P35244 121 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 DCDP81605 110 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 Q0VFX4 171 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 CDC16Q13042 620 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 GBX1Q14549 363 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 ZNF460Q14592 562 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 CYP2A13Q16696 494 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 NKAIN1Q4KMZ8 207 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 RHBDD2Q6NTF9 364 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 LINC00696Q6ZRV3 163 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 FRA10AC1Q70Z53 315 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 TAX1BP1Q86VP1 789 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 SLC22A9Q8IVM8 553 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 CPNE9Q8IYJ1 553 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 GPR135Q8IZ08 494 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 CENPLQ8N0S6 344 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 C2orf73Q8N5S3 287 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 METTL27Q8N6F8 245 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 STAG3L4Q8TBR4 150 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 N4BP2L2Q92802 583 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 PTERQ96BW5 349 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 WDR77Q9BQA1 342 aaPredicted RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 TRIM54Q9BYV2 358 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 ATP13A2Q9NQ11 1180 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 AGPAT4Q9NRZ5 378 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 NDOR1Q9UHB4 597 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 ITGB1BP2Q9UKP3 347 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 RUVBL2Q9Y230 463 aaKnown RBP11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 MED16Q9Y2X0 877 aa11.22□□□□□ -0.61
CSNK1E-212ENST00000494610 C2orf74A8MZ97 194 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 SLC16A5O15375 505 aa11.21□□□□□ -0.61
CSNK1E-212ENST00000494610 ZSCAN9O15535 394 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms