RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 JRKO75564 520 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 HPP00738 406 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 HEXBP07686 556 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 COX6A1P12074 109 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 GP5P40197 560 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 SLC12A2P55011 1212 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 USP10Q14694 798 aaKnown RBP23.67■■□□□ 1.38
HMGN1-217ENST00000489072 C18orf21Q32NC0 220 aaPredicted RBP23.67■■□□□ 1.38
HMGN1-217ENST00000489072 KBTBD12Q3ZCT8 623 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 PLEKHN1Q494U1 663 aaPredicted RBP23.67■■□□□ 1.38
HMGN1-217ENST00000489072 FAAH2Q6GMR7 532 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 ADAMTSL2Q86TH1 951 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 PDSS2Q86YH6 399 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 MOCOSQ96EN8 888 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 LRRC1Q9BTT6 524 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 FAM129AQ9BZQ8 928 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 DERL2Q9GZP9 239 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 TXNDC16Q9P2K2 825 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 SLC22A14Q9Y267 594 aa23.67■■□□□ 1.38
HMGN1-217ENST00000489072 A0A1W2PQ72 361 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 SGK494L7N484 410 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 OR1F1O43749 312 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 FAM155BO75949 473 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 URI1O94763 535 aaPredicted RBP23.66■■□□□ 1.38
HMGN1-217ENST00000489072 IPO13O94829 963 aaKnown RBP23.66■■□□□ 1.38
HMGN1-217ENST00000489072 BMP10O95393 424 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 EEF1A2Q05639 463 aaKnown RBP23.66■■□□□ 1.38
HMGN1-217ENST00000489072 CSHL1Q14406 222 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 C8orf74Q6P047 294 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 CTAGE3PQ8IX95 158 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 TSPAN17Q96FV3 270 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 THOC3Q96J01 351 aaKnown RBP23.66■■□□□ 1.38
HMGN1-217ENST00000489072 EGFL8Q99944 293 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 LHPPQ9H008 270 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 SLAMF7Q9NQ25 335 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 HCN3Q9P1Z3 774 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 MKL2Q9ULH7 1088 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 SCN2AQ99250 2005 aa23.66■■□□□ 1.38
HMGN1-217ENST00000489072 CTAGE15A4D2H0 777 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 SLC35G6P0C7Q6 338 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 REEP5Q00765 189 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 GUCY2DQ02846 1103 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 INPP5JQ15735 1006 aaPredicted RBP23.65■■□□□ 1.38
HMGN1-217ENST00000489072 ZKSCAN8Q15776 578 aaPredicted RBP23.65■■□□□ 1.38
HMGN1-217ENST00000489072 FRA10AC1Q70Z53 315 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 NDUFAF7Q7L592 441 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 CTAGE6Q86UF2 777 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 FBF1Q8TES7 1133 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 RHBDF1Q96CC6 855 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 PELI2Q9HAT8 420 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 ANKHQ9HCJ1 492 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 ZDHHC18Q9NUE0 388 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 B3GNT3Q9Y2A9 372 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 DYRK1BQ9Y463 629 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 CSAG2Q9Y5P2 127 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 SLC22A7Q9Y694 548 aa23.65■■□□□ 1.38
HMGN1-217ENST00000489072 NDUFS4O43181 175 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 RDH16O75452 317 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 CCDC166P0CW27 439 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 GMPRP36959 345 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 GDF5P43026 501 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 SCTRP47872 440 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 SLC6A12P48065 614 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 EFTUD2Q15029 972 aaKnown RBP eCLIP23.64■■□□□ 1.372e-22■■■■■ 48.1
HMGN1-217ENST00000489072 AGAP7PQ5VUJ5 663 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 TMEM205Q6UW68 189 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 NXPE4Q6UWF7 544 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 IGFL2Q6UWQ7 119 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 ZADH2Q8N4Q0 377 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 EFCAB3Q8N7B9 438 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 AMER2Q8N7J2 671 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 PPM1NQ8N819 430 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 OR51Q1Q8NH59 317 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 AGAP4Q96P64 663 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 VN1R1Q9GZP7 353 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 NAALAD2Q9Y3Q0 740 aa23.64■■□□□ 1.37
HMGN1-217ENST00000489072 LOC102723996A0A087X1L8 192 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 IGHV1-45A0A0A0MS14 117 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 NSG1A0A0A6YYJ2 146 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 KLHL18O94889 574 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 CD1DP15813 335 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 STMN1P16949 149 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 CXCR2P25025 360 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 XCR1P46094 333 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 HNMTP50135 292 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 PWP1Q13610 501 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 TGFBIQ15582 683 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 WHAMMP3Q1A5X7 153 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 GRTP1Q5TC63 336 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 IRAK1BP1Q5VVH5 260 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 TMPRSS11BQ86T26 416 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 ATCAYQ86WG3 371 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 KLHDC8AQ8IYD2 350 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 AFAP1L2Q8N4X5 818 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 ANKRD53Q8N9V6 530 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 TM9SF4Q92544 642 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 ZFP69BQ9UJL9 534 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 KCNE2Q9Y6J6 123 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 ESPL1Q14674 2120 aa23.63■■□□□ 1.37
HMGN1-217ENST00000489072 OR2W5A6NFC9 320 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms