RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 OR2W5A6NFC9 320 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 FAM159BA6NKW6 160 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 KLHL41O60662 606 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 WDR47O94967 919 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 B3GALT4O96024 378 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 STMN1P16949 149 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 GMPRP36959 345 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 GP5P40197 560 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 GUCY2DQ02846 1103 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 SLMAPQ14BN4 828 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 FBXO48Q5FWF7 155 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 AGAP7PQ5VUJ5 663 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 TMEM214Q6NUQ4 689 aaKnown RBP16.73■□□□□ 0.27
COL6A1-204ENST00000486023 ZC3H7AQ8IWR0 971 aaKnown RBP16.73■□□□□ 0.27
COL6A1-204ENST00000486023 ARHGEF39Q8N4T4 335 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 TM9SF4Q92544 642 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 EXT2Q93063 718 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 TM4SF19Q96DZ7 209 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 AGAP4Q96P64 663 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 RBBP8Q99708 897 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 RBCK1Q9BYM8 510 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 LHPPQ9H008 270 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 SPNS1Q9H2V7 528 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 LRRC4CQ9HCJ2 640 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 C14orf105Q9NVL8 296 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 NAALAD2Q9Y3Q0 740 aa16.73■□□□□ 0.27
COL6A1-204ENST00000486023 FLNBO75369 2602 aaKnown RBP16.73■□□□□ 0.27
COL6A1-204ENST00000486023 IGHV3-20A0A0C4DH32 117 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 RDH16O75452 317 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 IPO13O94829 963 aaKnown RBP16.72■□□□□ 0.27
COL6A1-204ENST00000486023 NSA2O95478 260 aaKnown RBP16.72■□□□□ 0.27
COL6A1-204ENST00000486023 HPP00738 406 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 GSTA2P09210 222 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 VARSP26640 1264 aaKnown RBP16.72■□□□□ 0.27
COL6A1-204ENST00000486023 SPRP35270 261 aaPredicted RBP16.72■□□□□ 0.27
COL6A1-204ENST00000486023 XCR1P46094 333 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 GLRBP48167 497 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 SOX8P57073 446 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 Q0VFX4 171 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 CBLBQ13191 982 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 EFTUD2Q15029 972 aaKnown RBP eCLIP16.72■□□□□ 0.27
COL6A1-204ENST00000486023 INPP5JQ15735 1006 aaPredicted RBP16.72■□□□□ 0.27
COL6A1-204ENST00000486023 UAP1Q16222 522 aaPredicted RBP16.72■□□□□ 0.27
COL6A1-204ENST00000486023 GRTP1Q5TC63 336 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 ATG9BQ674R7 924 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 NXPE4Q6UWF7 544 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 NDUFAF7Q7L592 441 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 ADAMTSL2Q86TH1 951 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 GPSM1Q86YR5 675 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 HPS6Q86YV9 775 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 CISD2Q8N5K1 135 aaKnown RBP16.72■□□□□ 0.27
COL6A1-204ENST00000486023 ABHD11Q8NFV4 315 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 METTL21AQ8WXB1 218 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 PNPLA2Q96AD5 504 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 ESAMQ96AP7 390 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 CNDP1Q96KN2 507 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 POPDC3Q9HBV1 291 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 B3GNT3Q9Y2A9 372 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 KCNE2Q9Y6J6 123 aa16.72■□□□□ 0.27
COL6A1-204ENST00000486023 UBR5O95071 2799 aaPredicted RBP16.72■□□□□ 0.27
COL6A1-204ENST00000486023 NBASA2RRP1 2371 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 TRBC2A0A5B9 178 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 H0YIG0 161 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 H2AFYO75367 372 aaKnown RBP16.71■□□□□ 0.27
COL6A1-204ENST00000486023 CDC123O75794 336 aaPredicted RBP16.71■□□□□ 0.27
COL6A1-204ENST00000486023 SORBS2O94875 1100 aaKnown RBP16.71■□□□□ 0.27
COL6A1-204ENST00000486023 KLHL18O94889 574 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 BMP10O95393 424 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 C8orf89P0DMQ9 161 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 COX6A1P12074 109 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 STX2P32856 288 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 RAB10P61026 200 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 OLR1P78380 273 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 RGS1Q08116 209 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 WHAMMP3Q1A5X7 153 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 ZNF572Q7Z3I7 529 aaPredicted RBP16.71■□□□□ 0.27
COL6A1-204ENST00000486023 PDSS2Q86YH6 399 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 KBTBD2Q8IY47 623 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 Q8NA96 180 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 OR4K1Q8NGD4 311 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 OR5T3Q8NGG3 340 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 IFT81Q8WYA0 676 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 ANKRD7Q92527 254 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 C19orf60Q96EN9 201 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 PEX11GQ96HA9 241 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 MAGEB10Q96LZ2 347 aaPredicted RBP16.71■□□□□ 0.27
COL6A1-204ENST00000486023 GPR22Q99680 433 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 AIF1LQ9BQI0 150 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 MCMBPQ9BTE3 642 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 TGIF2Q9GZN2 237 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 DERL2Q9GZP9 239 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 WWOXQ9NZC7 414 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 CD274Q9NZQ7 290 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 PTGFRNQ9P2B2 879 aa16.71■□□□□ 0.27
COL6A1-204ENST00000486023 SETXQ7Z333 2677 aaKnown RBP16.71■□□□□ 0.26
COL6A1-204ENST00000486023 PRRC2CQ9Y520 2896 aaKnown RBP16.71■□□□□ 0.26
COL6A1-204ENST00000486023 CTAGE15A4D2H0 777 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 DNAJB6O75190 326 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 WFS1O76024 890 aa16.7■□□□□ 0.26
COL6A1-204ENST00000486023 CELA2AP08217 269 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms