RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CYP8B1Q9UNU6 501 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 FAM227AF5H4B4 570 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 ZNF84P51523 738 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 GRHL2Q6ISB3 625 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 TMPPEQ6ZT21 453 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 FAM43BQ6ZT52 329 aaPredicted RBP8.46□□□□□ -1.06
HPS4-209ENST00000466781 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.46□□□□□ -1.06
HPS4-209ENST00000466781 OR13C4Q8NGS5 318 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 SLC7A6OSQ96CW6 309 aaPredicted RBP8.46□□□□□ -1.06
HPS4-209ENST00000466781 CDK15Q96Q40 435 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 FEM1AQ9BSK4 669 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 NELFAQ9H3P2 528 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 SLC32A1Q9H598 525 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 USP29Q9HBJ7 922 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 FLRT1Q9NZU1 646 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 WNT6Q9Y6F9 365 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 C2CD4BA6NLJ0 364 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 TP53I11O14683 189 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 ENTPD6O75354 484 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 SASH3O75995 380 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 CLPXO76031 633 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 KLF8O95600 359 aaPredicted RBP8.46□□□□□ -1.06
HPS4-209ENST00000466781 MATN1P21941 496 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 RBMS1P29558 406 aaKnown RBP8.46□□□□□ -1.06
HPS4-209ENST00000466781 SCNN1AP37088 669 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 MAGEA2P43356 314 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 IRF5Q13568 498 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 CDKL4Q5MAI5 379 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 LRRC66Q68CR7 880 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 SYCE2Q6PIF2 218 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 NAPRTQ6XQN6 538 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 C15orf40Q8WUR7 153 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 ESAMQ96AP7 390 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 ZNF285Q96NJ3 590 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 TTYH2Q9BSA4 534 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 TIGARQ9NQ88 270 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 TNFRSF10DQ9UBN6 386 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 DNAJB9Q9UBS3 223 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 GNG8Q9UK08 70 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 TMEM98Q9Y2Y6 226 aa8.46□□□□□ -1.06
HPS4-209ENST00000466781 HCRTO43612 131 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 KDM4BO94953 1096 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 TYRP1P17643 537 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 FBLP22087 321 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 RPL10P27635 214 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 MLC1Q15049 377 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 CBR4Q8N4T8 237 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 USB1Q9BQ65 265 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 XPNPEP1Q9NQW7 623 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 VNN3Q9NY84 501 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 KCNK6Q9Y257 313 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 A0A1B0GVT2 93 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 RNF225M0QZC1 329 aaPredicted RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 LDB2O43679 373 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 UGT1A9O60656 530 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 PSKH1P11801 424 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 BCKDHAP12694 445 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ANXA8P13928 327 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 TYRP14679 529 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ETS2P15036 469 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 UGT1A6P19224 532 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 UGT1A4P22310 534 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 CHRNA4P43681 627 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 SMSP52788 366 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 CTBP2P56545 445 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 GNG2P59768 71 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 DCDC1P59894 354 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 RPS24P62847 133 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 HERVK_113P63132 956 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 RPL6Q02878 288 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 CBLBQ13191 982 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 PAQR7Q86WK9 346 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 TFAP2BQ92481 460 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 KCNC2Q96PR1 638 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 CITED4Q96RK1 184 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 FAM83CQ9BQN1 747 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ERVK-6Q9BXR3 956 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 POLR2J2Q9GZM3 115 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 UGT1A7Q9HAW7 530 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 UGT1A10Q9HAW8 530 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 UGT1A8Q9HAW9 530 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 PDE7BQ9NP56 450 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 PLCL2Q9UPR0 1127 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 R3HDM2Q9Y2K5 976 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 ALG5Q9Y673 324 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 MYADML2A6NDP7 307 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 YJEFN3A6XGL0 299 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 EFCAB9A8MZ26 197 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 C2orf74A8MZ97 194 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 MTX2O75431 263 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 POP7O75817 140 aaKnown RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 VNN1O95497 513 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 HTR1AP08908 422 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 ENGP17813 658 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 S100A2P29034 98 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 GPR153Q6NV75 609 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 LINC00471Q8N535 108 aa8.45□□□□□ -1.06
HPS4-209ENST00000466781 METTL27Q8N6F8 245 aaPredicted RBP8.45□□□□□ -1.06
HPS4-209ENST00000466781 OR2AP1Q8NGE2 309 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms